Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00015 ATGGCTTGTGATTTTTCTTCATTGGAATCTGTTCAACATTACTTGCTTGAGCTTGAAAATGATTCCCAAACTCTCATCGATGCTTCCAACCACCAAATCTGTTATTCATTTCCGAGCCCTAATTCTAGTCATGATTCAACGCAGGCCGTAGTTAGTAACGGCGGTGATGTGAAGAAATCAACCGCGTCCAAAAAGGGATCGTCCGCAATGGCGCGTGAATCTCACGCTCCACCGATGTGGAAGCACTACCGGGGCGTGAGGCGTAGGCCGTGGGGGAAGTTCGCGGCGGAGATAAGGGACCCGAAGAAGAACGGTGCCAGAGTTTGGCTTGGGACTTATGAGACGGAAGAAGAAGCTGGTTTGGCTTATGATAGAGCTGCTTTCAAGATGCGTGGTAGTAAAGCCAAGCTCAATTTTCCCCATCTCATTGGATCCCACGCGCCGCCGGAGCCGGTGAGAGTGGCGGAAGCTTCGAAGCGGAAGTTGCCGGAGCCTTGTTCACCGGCTTCGGAGGATGGTTCGGGGTCAAAGAAGAGGAAGAGGCTAGTTGATGTGTTGAATAGGTTAGCTAAGCGTAGAAGGCAAGTGCAAGTGTTTGAAATGGGTATGGGGGCAAATGATGTTGATGTTGATCAATGGTTGAATGATTGTGGTGTAATTTGGTGCTCATAA 672 0.4955 MACDFSSLESVQHYLLELENDSQTLIDASNHQICYSFPSPNSSHDSTQAVVSNGGDVKKSTASKKGSSAMARESHAPPMWKHYRGVRRRPWGKFAAEIRDPKKNGARVWLGTYETEEEAGLAYDRAAFKMRGSKAKLNFPHLIGSHAPPEPVRVAEASKRKLPEPCSPASEDGSGSKKRKRLVDVLNRLAKRRRQVQVFEMGMGANDVDVDQWLNDCGVIWCS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00015 223 MobiDBLite consensus disorder prediction 37 68 - -
Sebi160g00015 223 PANTHER DNA-BINDING DOMAIN 48 174 IPR044808 GO:0003700|GO:0009873
Sebi160g00015 223 FunFam Ethylene-responsive transcription factor 2 81 141 - -
Sebi160g00015 223 PRINTS Ethylene responsive element binding protein signature 122 142 IPR001471 GO:0003700|GO:0006355
Sebi160g00015 223 PRINTS Ethylene responsive element binding protein signature 83 94 IPR001471 GO:0003700|GO:0006355
Sebi160g00015 223 CDD AP2 81 142 IPR001471 GO:0003700|GO:0006355
Sebi160g00015 223 Pfam AP2 domain 82 132 IPR001471 GO:0003700|GO:0006355
Sebi160g00015 223 SUPERFAMILY DNA-binding domain 82 141 IPR016177 GO:0003677
Sebi160g00015 223 ProSiteProfiles AP2/ERF domain profile. 82 140 IPR001471 GO:0003700|GO:0006355
Sebi160g00015 223 SMART rav1_2 82 146 IPR001471 GO:0003700|GO:0006355
Sebi160g00015 223 MobiDBLite consensus disorder prediction 146 180 - -
Sebi160g00015 223 MobiDBLite consensus disorder prediction 37 75 - -
Sebi160g00015 223 Gene3D AP2/ERF domain 81 141 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00015 Sebi-Chr160 175908 176579 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00015 57 184 AP2-EREBP Transcription Factor Family AT2G44840 59.690 5.62e-41 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi160g00015 AP2 2.5e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00015 K09286 - gmx:100527194 273.092