Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi160g00004 ATGAGAACTTTTCCCTTAAACTTCCCTTGTGCTGTACAAGGAACTATATTTTCTCAAAGGAAACAAGTAACTCAGGGATGCACAAATCAGAAATCAAAGGATTACCTAGTGCAGGATGGCTGTATATTACATTCTGAGAATGCATTAAGGAGGAAACTTATCCTCTCTGTTTTGGTCTCAACTGGTGTTTTTCCAACTTTATCTTCTTATGGGAAGACAAAGGGCTCGAATCCATATAATGAAAAACGCTTGCTACAACAAAATAGGCAGAGACAGAAAGAAAACAATGCACCAGAGGACTTCCCAAATTTTATTAGAGAAGGTTTTACAGTCAGAGTGATATCATCAGATAACTATATAAAGCGTGATTCAGGACTCATATACCGAGATTTTGAAGTTGGTAAAGGTGATTGCCCAAAGGATGGTCAGCAGGTCATATTTCACTATATTGGCTATAACGAATCTGGCCGTCGTATTGACAGCACTTATTTGCAGGGTTCTCCTGCCAAAATTCGCATGGGTACTAAGGCATTGGTTCCAGGATTTGAAGAAGGAATTAGAGACATGAGGCCAGGTGGAAAGAGAAGAATCATTATTCCCCCTGAACTTGGACCGCCGGTAGGACCTTCAACCTTTTTCAGCTCAAAACAGTTTGAAGTTTTTGATGTTGAATTATTAAGCATACAAAACTGCGAAAGAAGGACCATAGCCTTTTACTCTGATGTCGTATGCAATTGA 738 0.3943 MRTFPLNFPCAVQGTIFSQRKQVTQGCTNQKSKDYLVQDGCILHSENALRRKLILSVLVSTGVFPTLSSYGKTKGSNPYNEKRLLQQNRQRQKENNAPEDFPNFIREGFTVRVISSDNYIKRDSGLIYRDFEVGKGDCPKDGQQVIFHYIGYNESGRRIDSTYLQGSPAKIRMGTKALVPGFEEGIRDMRPGGKRRIIIPPELGPPVGPSTFFSSKQFEVFDVELLSIQNCERRTIAFYSDVVCN 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi160g00004 245 Pfam FKBP-type peptidyl-prolyl cis-trans isomerase 139 225 IPR001179 GO:0003755
Sebi160g00004 245 SUPERFAMILY FKBP-like 95 229 - -
Sebi160g00004 245 Gene3D - 83 237 IPR046357 GO:0003755
Sebi160g00004 245 ProSiteProfiles FKBP-type peptidyl-prolyl cis-trans isomerase domain profile. 142 229 IPR001179 GO:0003755
Sebi160g00004 245 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-2, CHLOROPLASTIC 7 245 IPR044239 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi160g00004 Sebi-Chr160 17593 21306 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi160g00004 132 231 Calmodulin-binding Proteins AT5G48570 33.333 5.54e-10 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi160g00004 - - gmx:100305486 438.343