Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi160g00001 | ATGGGTGAGAAAGACGATGGTTTGAATTTGGGTTTGAGCTTGAGCTTAGGATGTGGAGAAAATGCAAGTAATAGTAATAATAATCAACCTCCTTTGAAGATGAGTCTCATGCACAAGCCTCCTCAATCGTTTCCAAACCAAAGGCCTTCCTTCAATAGCTTATTCCATTTTCATGATCGGAGCTCCGAGACGAGGTCGTTTCTCCGCGGAATGGACATGAACTCTCCGCGGCCGGCGGCGGCCGCGTTCGACGACGAAAACGGAGTTTCATCGCCGAACAGCACCGTTTCGAGCATCAGTGGGAAGCGGAGCGAGAGAGAGGGTAACGGAGACGAGAACGATGCTGCTGAGAGGACCTCGTGTTCTCGGGGAGGAAGCGACGATGATGACGGCGGCGGTGATGGCGGCGATGGTGACGGCGACACTTCAAGGAAGAAGCTGAGGTTGTCTAAGGAACAGTCCTTGGTGCTGGAAGAAACCTTCAAGGAGCACAATACCCTGAATCCGAAACAAAAACAAGCATTGGCAAAGCAGCTGAATCTGAGGCCTAGACAGGTTGAGGTGTGGTTTCAAAACAGAAGAGCAAGGACCAAGTTGAAGCAGACTGAAGTGGATTGTGAATACTTGAAGAGATGCTGTGAGACTCTAACTGAAGAGAATAGGAGGTTGCAAAAGGAAGTTCAAGAGCTTAGGGCATTGAAATTATCCCCACAGCTCTACATGCACATGAACCCTCCCACCACTCTTACAATGTGCCCTTCATGTGAGCGTGTTGCTGTCTCATCTACATCCTCCTCATCCGCCGCCGCGCCCTCTGCCCCGGCACCGACTAATCGCAGCCCAATGAGCCCGAGCATCCAGCGGCCGGTACCTGTCAACCCTTGGGCGGCAATGTCTATCCAACACCACCGTCCCCGGCCATAA | 924 | 0.5195 | MGEKDDGLNLGLSLSLGCGENASNSNNNQPPLKMSLMHKPPQSFPNQRPSFNSLFHFHDRSSETRSFLRGMDMNSPRPAAAAFDDENGVSSPNSTVSSISGKRSEREGNGDENDAAERTSCSRGGSDDDDGGGDGGDGDGDTSRKKLRLSKEQSLVLEETFKEHNTLNPKQKQALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKLSPQLYMHMNPPTTLTMCPSCERVAVSSTSSSSAAAPSAPAPTNRSPMSPSIQRPVPVNPWAAMSIQHHRPRP | 307 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi160g00001 | 307 | Coils | Coil | 206 | 236 | - | - | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 263 | 307 | - | - | |
Sebi160g00001 | 307 | Pfam | Homeodomain | 144 | 198 | IPR001356 | GO:0003677 | |
Sebi160g00001 | 307 | Gene3D | - | 136 | 205 | - | - | |
Sebi160g00001 | 307 | ProSiteProfiles | 'Homeobox' domain profile. | 140 | 200 | IPR001356 | GO:0003677 | |
Sebi160g00001 | 307 | SMART | halz | 200 | 243 | IPR003106 | GO:0006355|GO:0043565 | |
Sebi160g00001 | 307 | ProSitePatterns | 'Homeobox' domain signature. | 175 | 198 | IPR017970 | GO:0000981|GO:0006355 | |
Sebi160g00001 | 307 | FunFam | Homeobox-leucine zipper protein 18 | 128 | 205 | - | - | |
Sebi160g00001 | 307 | SMART | HOX_1 | 142 | 204 | IPR001356 | GO:0003677 | |
Sebi160g00001 | 307 | ProSiteProfiles | Prokaryotic membrane lipoprotein lipid attachment site profile. | 1 | 18 | - | - | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 87 | 103 | - | - | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 16 | 33 | - | - | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 263 | 286 | - | - | |
Sebi160g00001 | 307 | Pfam | Homeobox associated leucine zipper | 200 | 234 | IPR003106 | GO:0006355|GO:0043565 | |
Sebi160g00001 | 307 | Pfam | HD-ZIP protein N terminus | 1 | 107 | IPR006712 | GO:0005634 | |
Sebi160g00001 | 307 | PANTHER | HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14 | 10 | 280 | - | - | |
Sebi160g00001 | 307 | CDD | homeodomain | 144 | 201 | IPR001356 | GO:0003677 | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 40 | 57 | - | - | |
Sebi160g00001 | 307 | SUPERFAMILY | Homeodomain-like | 129 | 201 | IPR009057 | - | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 1 | 146 | - | - | |
Sebi160g00001 | 307 | MobiDBLite | consensus disorder prediction | 104 | 130 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi160g00001 | Sebi-Chr160 | 2041 | 4443 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi160g00001 | 41 | 307 | Homeobox Transcription Factor Family | AT3G60390 | 63.571 | 1.37e-100 | 296 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | HB-HD-ZIP | Sebi160g00001 | HD-ZIP_N | 2.2e-28 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi160g00001 | K09338 | - | gmx:100798480 | 420.624 |