Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00086 GACTTTGAGGTGGATGAACTCAGTACAGTATCAGGGCAAACGGGCATTTCTGGAAAGTCAAATACTGAGCCACTAAGTAGATTTCTTCAAGAAAGTATGAGGTCTTACTATCATAGTTGTTATGATAAGGCTGAGGGCAGTTTATGGATACACAAGTACAAGCCAACAAAGGCCTTTGAGGTGTGCGGTAATGATGAATCTCTAAATTTCTTGCGTGACTGGTTACACCTTTGGCATGAAAGACGTTACCAAAGCAGAAAGGATTCCTCTAACTGGGATCAAAGAGATACTCAAAACGATGATGTTTATAGCTGTTCTGATGGTGACTATTCTTCAAAAGATCTCAACAAGGAGGATTCCCTGCAGAACGTTCTTTTGATTACAGGACCAATTGGGAGTGGCAAGTCTGCAGCTGTCTATGCTTGTGCCCAGGAACAAGGGTTTGACGTTTTAGAGCTCAATGCATCAGACTGTCGAAATGGGACTGCTGTCAAGCAGTATTTTGGAGATGCTCTTGGATCACATGGTTGCAAAAGGTTACTGGAACACAGTGTGAGTTCACAGAAGAAAACTGTGATATTGCCCCCAGCTCCAGCTTTGCCTAATGGTAAAGCAGTTGAGGAGATGGATGATGGGGTGATTGAATTGATAACCATATCCAATGGTGGAGCTCATAGTCCTGATGGAAAATCTCAGATGTTACATGAAAAAAATAATGTATTTACATGTGATAGTGTTCAAACTTTAATTTTAGTTGAGGATGTGGACATCCTTTTTCCTGAAGATCGTGGATGTATTGCTGCCATAAAACACATTGCTGAGACAGCAAAAGGGCCAATTATATTGACCAGCAACAGTAATAATGGTGGCCTTCCAGAAAATTTTGTCAGACTACATATTCCTTTCTCATTGCCATTGCGAGATGAGTTGCTTTGCCATTTGTACATGGTTTGTGACACTGAAGAAGTCAACATCAATCCACTTTTACTGGAGAAGTTTATCAAGTCTTGCGATGGAGATATTCGAAAAACCATTATGCATGTTCAGTTCTGGTTCCAGAATAAAAAATCTAGAAAAGACAGGAAAGTGCAGACAGTATATGGCTCACTTCCATTTGATCTCGAGGCTGGTCATCAGATACTACCAAAGATCATACCCTGGGATTTTCCCTCAGAGCTATCCAAACTAATTGAGAAAGAAGTTTCCAAGTCAGTAATCGTAATGGAAGAAAACTCATGTTTGCAGGGGTTAGTTGAGGAAGAGCTTCACAAAAATGAAAAGCAAAACAATTTAGATGTACAATGTAAGGGAACTGATTATTTAGAGGCCAAGGTAGAGGTGAAGAGGAATAGATCTATTACAGACTGCAGCGAGTTTGGTCAATATAGTGCTATTTCTGAGCTTGCTAATTGTTCTGGATCCCCAGTAACATCCTTTTGGCAAAAGGGCCAAAGGAAACTTATAGTGATGTCCTCTGAGTCTGTGGATAAGGATCCAAATAATGGACATTCACTAGAGGGTCATGATGAATCTTTCAAGAGACAATCCCTTGAAGGAAACAGTGTATCTTCCTGTAAGTTTCAATTGAATCATTGCTACACTAGTTCGTCATTTTGCAAGCTGGCTTGTTCTAGTTTGGAGGATTCAGAAGAACAGCGTAAATATTTAGGAACAGCTTATGATGCCTGTTTAAATGAAACATGTAAATCATCTGGTATATCCAGTTTTCCAGAATCAACAATTGTTCCAGAGATTGCAATTCAAAATAGAGTAGAGACAATGTCTGGAGCAGTGTCTTCTGGCCATCTTGCCAGTCCAGTAGAAGTTTCTCTGGATAATGAGCTGACACCATTCACTTTCAGTGTTTGTCAGCGCATAGCCAGCCTGCCACAAAATTTGGATTCTTTGGTGAATACTGAAATTCCAGAATCTTCTCCAAAAGCAGCTGTGCAAGTTTTTAGAGATGAGAACATGGAAACCACAACTGTGTATAACATGATGAATGAGTGCAGTCATGCTGATTTTAAATTGAAGTTTGTTGAGTCCAGTCCATCTATGGAGATAGATATGGTGCAAAATTTGTGGAGGAAACTTTGTGATTGTCGAACGGATTTAAGACAGCACGCCACCTCAGAACAGCTAGGTGCTATTCAAGCTGTTAAACTTGCTAGTGGGATGACCAATCTAATTTCAGAAGCTGACTTCTTGTTTCGTAATCACCAACAAAAGCAATGTGGTATTATGGAACCTCCTATTTTCCTTTCTGATGAAGCCACATTTAGTTGGTATAATGAGCAAATGATGATGTCCACTGTTGCTGTACATGGTTTTTGTTTTTATGCCAAACATATATCAGATGTGGGATCAAAGTTGGGTTGTGAGAACAGGGTAGACATAACTTCAGAGATGTTGGCTTCCACTACTAATATCATGGCACTGGGGAAGTTATCTAGACAGGACCACACAAAAAGCATGAGTAACTGTTCTGAAAAGCAGTCAGAGCTGAAAACCCCAAGAAATAATATGAAGAGGAAATACAATGAAAACCGAACATCTCTATTCAATGTGATCCAGTCCATAGTTCCTGCAAGATTATCATTGGCAATGAAAGGTGTTGCATTCAGTGAATATCTATCTTCACTACGCCAAATTTCAATTTCAGAAGGTTTCCGAATTACACATGGTGTTAAAAAGATGAGAAAAGGAAGGACGCGGGGTGCTCAACATTATTTGAGCAGAGGTTCAATGTTGTCTCCTGAAGATATATCATTGGTGTGTGAGGGTGATTTGTACAGAAAGATTTCTTCACAGTACACCTCTAACATGGAAGCAAATGTACAAGATTAA 2847 0.3969 DFEVDELSTVSGQTGISGKSNTEPLSRFLQESMRSYYHSCYDKAEGSLWIHKYKPTKAFEVCGNDESLNFLRDWLHLWHERRYQSRKDSSNWDQRDTQNDDVYSCSDGDYSSKDLNKEDSLQNVLLITGPIGSGKSAAVYACAQEQGFDVLELNASDCRNGTAVKQYFGDALGSHGCKRLLEHSVSSQKKTVILPPAPALPNGKAVEEMDDGVIELITISNGGAHSPDGKSQMLHEKNNVFTCDSVQTLILVEDVDILFPEDRGCIAAIKHIAETAKGPIILTSNSNNGGLPENFVRLHIPFSLPLRDELLCHLYMVCDTEEVNINPLLLEKFIKSCDGDIRKTIMHVQFWFQNKKSRKDRKVQTVYGSLPFDLEAGHQILPKIIPWDFPSELSKLIEKEVSKSVIVMEENSCLQGLVEEELHKNEKQNNLDVQCKGTDYLEAKVEVKRNRSITDCSEFGQYSAISELANCSGSPVTSFWQKGQRKLIVMSSESVDKDPNNGHSLEGHDESFKRQSLEGNSVSSCKFQLNHCYTSSSFCKLACSSLEDSEEQRKYLGTAYDACLNETCKSSGISSFPESTIVPEIAIQNRVETMSGAVSSGHLASPVEVSLDNELTPFTFSVCQRIASLPQNLDSLVNTEIPESSPKAAVQVFRDENMETTTVYNMMNECSHADFKLKFVESSPSMEIDMVQNLWRKLCDCRTDLRQHATSEQLGAIQAVKLASGMTNLISEADFLFRNHQQKQCGIMEPPIFLSDEATFSWYNEQMMMSTVAVHGFCFYAKHISDVGSKLGCENRVDITSEMLASTTNIMALGKLSRQDHTKSMSNCSEKQSELKTPRNNMKRKYNENRTSLFNVIQSIVPARLSLAMKGVAFSEYLSSLRQISISEGFRITHGVKKMRKGRTRGAQHYLSRGSMLSPEDISLVCEGDLYRKISSQYTSNMEANVQD 948
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00086 948 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 307 368 - -
Sebi15g00086 948 PANTHER CELL CYCLE CHECKPOINT PROTEIN RAD17 21 936 IPR004582 GO:0006281
Sebi15g00086 948 MobiDBLite consensus disorder prediction 1 22 - -
Sebi15g00086 948 Gene3D - 46 297 IPR027417 -
Sebi15g00086 948 MobiDBLite consensus disorder prediction 7 22 - -
Sebi15g00086 948 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 362 IPR027417 -
Sebi15g00086 948 Gene3D - 305 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00086 Sebi-Chr15 3464891 3477904 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi15g00086 49 350 Core DNA Replication Machinery Family AT5G22010 22.222 5.73e-09 58.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00086 K26118 - gmx:100815984 1240.71