Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00058 ATGCTGCTTATTTTCGAGAAAACTAAAATATTTGATTGTGGTGTTTTACATCAGGTAGCTGATATAACACACTCAGTACAACAGCCTGCTGGAAAGAAGTTGGATGGGGGAGGTGTTGCAAGTGGAGGTCTTAGAGAACTAATATCTTGCATTGCAAGGACTGCAGTTGTTGTTGGAGTGGATAGGAACTTCATGGAGGTGCATGATGATCCACTGAGTGCACCTGTTGATGGTCCAACACAGTGGGGATTTATAAACCTGCTGAGTTTTGGCAACTTGAAGACCAAACACCACAACCTACAAAAAGGAGGCATGGATCATCTATTTACACACTCAAGGAGATGGGAGAGGCAACATGTTCATTCAGTGATGATAATCTTCTTGGAAAAGGATTTGGCAGGGTCTACAGGGGTACTCTGTGGTCAAAAGAGATTCCTAGTGTATGAATATATGCTTAATGGGAACCTGCAAGATCATTTGAATGGAATCAATGAAAGAAAAATGGATTGGCCTCTAAGACTCAAAGTGGCATTGGGAGCTGCAAAAGGTCTTGCTTATCTCCAGTCAAGTTCTTGTGTTGGAATTCCTATTTTTCATAGAGATTTAAAATCCACCAACATTCTTTTAATTAATGCCAATTTTGAAGAAAAGATATATGATTTTGGGCTTGCCAAACTAATGCCAGAAGGACAAGAGACACGTGACTGCCAGAGTACTTGGTACCTTTGGCTATTTTGA 738 0.4051 MLLIFEKTKIFDCGVLHQVADITHSVQQPAGKKLDGGGVASGGLRELISCIARTAVVVGVDRNFMEVHDDPLSAPVDGPTQWGFINLLSFGNLKTKHHNLQKGGMDHLFTHSRRWERQHVHSVMIIFLEKDLAGSTGVLCGQKRFLVYEYMLNGNLQDHLNGINERKMDWPLRLKVALGAAKGLAYLQSSSCVGIPIFHRDLKSTNILLINANFEEKIYDFGLAKLMPEGQETRDCQSTWYLWLF 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00058 245 ProSitePatterns Serine/Threonine protein kinases active-site signature. 197 209 IPR008271 GO:0004672|GO:0006468
Sebi15g00058 245 Pfam Protein tyrosine and serine/threonine kinase 129 234 IPR001245 GO:0004672|GO:0006468
Sebi15g00058 245 SUPERFAMILY Aldolase 19 87 - -
Sebi15g00058 245 Gene3D Transferase(Phosphotransferase) domain 1 109 242 - -
Sebi15g00058 245 SUPERFAMILY Protein kinase-like (PK-like) 136 241 IPR011009 -
Sebi15g00058 245 ProSiteProfiles Protein kinase domain profile. 5 245 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi15g00058 245 PANTHER OS01G0750732 PROTEIN 141 233 - -
Sebi15g00058 245 Gene3D Aldolase class I 4 104 IPR013785 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00058 Sebi-Chr15 1888410 1890850 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi15g00058 130 229 Receptor kinase-like Gene Family AT1G79620 50.495 8.97e-21 89.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Sebi15g00058 PK_Tyr_Ser-Thr 3.2e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00058 - - gmx:100819242 152.91