Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00057 ATGGAAGACAACCTCGCCGCCGGCGTCCTTACTCCCGAACACGCCGCCGCAGAAGAGGAATCAACCGGAGATGGGTGTAACTCTGCTTCCACGACGGCTACCGATGACGGCGACAACCAGAAGGGCCTCCGCCTGGTGCACCTCCTGATGGCGGCGGCGGAGGCCCTTACCGGCACCAACAAGAGCCATGACTTGGCTCGAGCGATATTGGTTCGGCTCAAGGAATTGGTGTCCCCAACCCACGGCACCAATATGGAGAGGCTCGCGGCGTATTTTACCGAAGCCCTCCAGAGTCTGCTAGATGGCGCGGTGGGTGCGCACACCACCACCCTTAAGCATTACATCATCGGTGGTCCCAATCATGAGGACCAACTAACGGACATGCTAGCAGCCTATCAGCTTCTTCAGGACATGTCACCTTATGTTAAGTTCGGCCATTTCACTGCCAATCAGGCCATCCTTGAGGCCGTGGCCCACGAGCGAAGGGTCCACATCGTTGATTATGACGTCATGGAAGGGGCCCAATGGGCTTCGCTCATGCAGGCCTTCGCTTCCAAGAAGGACGGCCCGCCGGGCCCGCACCTCCGCATCACTGCATTGTCCAGAAGCTGCGGCCGAGGCAATGGACGGAGATCCATCGCTACGGTACAAGAAACTGGACGAAGATTAACGGCGTTTGCAGCTTCCCTCGGACAGCCGTTTACATTTCATCAGTGCAGGTTGGACCCCGACGAAACGTTTCGTCCGTCTTCTCTGAAGCTGGTTCGCGGTGAAGCTTTGGTGTTCAACTGTATGCTGCACTTGCCTCACCTCAGCTACCGGGCCCCCGATTCGGTTGCTTCGTTCTTGAACGGTGCGAAGGAGTTAAACCCTAGGCTTGTGACTTTGGTGGAGGAGGAAGTGGGGCCTGTTGGAGACGAGGGCTTTGTTGGCTTGTTCATGGATTCGCTGCACCGTTACTCGGCTGTGTATGATTCGCTTGAAGCTGGGTTTCCCATGCAGAGATGGGCCCGGGGTTTGGTGGAGCGAGTGTTCTTGGGCCCACGAATAACAGGCTCTGTGGCCCGGTTATACCGGACGGGAGAGGAGGAAGAAAGAGGGTCGTGGGGGGAGTTATTGGGTGCGTGCGGGTTTAGTGGAGTTCCCATAAGCTTCGCTAACCATTGCCAAGCTAAGTTGTTGCTGGGTTTGTTTAACGATGGGTATAGGGTGGAGGAGGTGGGTAACAATAAGTTGGTGTTGGGTTGGAAATCAAGGCGTTTGCTTTCGGCATCTGTTTGGACTTTTGTTTCAGAAAGGCTCATCTCCGCGCTTGATAGGTCAATCTTTCTCTCTGATCTTCAACTCGAGTTCAGTTTTCTGTGCAATTGA 1371 0.5536 MEDNLAAGVLTPEHAAAEEESTGDGCNSASTTATDDGDNQKGLRLVHLLMAAAEALTGTNKSHDLARAILVRLKELVSPTHGTNMERLAAYFTEALQSLLDGAVGAHTTTLKHYIIGGPNHEDQLTDMLAAYQLLQDMSPYVKFGHFTANQAILEAVAHERRVHIVDYDVMEGAQWASLMQAFASKKDGPPGPHLRITALSRSCGRGNGRRSIATVQETGRRLTAFAASLGQPFTFHQCRLDPDETFRPSSLKLVRGEALVFNCMLHLPHLSYRAPDSVASFLNGAKELNPRLVTLVEEEVGPVGDEGFVGLFMDSLHRYSAVYDSLEAGFPMQRWARGLVERVFLGPRITGSVARLYRTGEEEERGSWGELLGACGFSGVPISFANHCQAKLLLGLFNDGYRVEEVGNNKLVLGWKSRRLLSASVWTFVSERLISALDRSIFLSDLQLEFSFLCN 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00057 456 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 42 424 IPR005202 -
Sebi15g00057 456 MobiDBLite consensus disorder prediction 23 38 - -
Sebi15g00057 456 ProSiteProfiles GRAS family profile. 36 428 IPR005202 -
Sebi15g00057 456 MobiDBLite consensus disorder prediction 1 38 - -
Sebi15g00057 456 Pfam GRAS domain family 45 428 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00057 Sebi-Chr15 1882137 1885257 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi15g00057 39 428 GRAS Transcription Factor Family AT3G54220 36.203 1.04e-56 196
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Sebi15g00057 GRAS 7.7e-102 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00057 - - egr:104431927 612.453