Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00056 ATGGATTCAGGGTCCTCTACTACTTCTACCTTTATTTGCCGATGGTTTCAAATGGAGTATGTCCCAGATGAGGACTTCGCTGAACTCCCTACTCTATATATGATTGAGATTGTTTACCCTGAATCTCCTACTGATTATGATAATGGTTTAGGTGTTTTTCCATTTGATGATATTCCTCTCATGTCATCCAATGTTCAATTTCATCATGTTTCAGCTGACAAGACTCTTTCTGCTATTGTATGTCAAAGGATTACTGCAGGTGCTGAAAACGTAATTCTGAGGGATGAATTTGATAACGATTTCGAATGTCACATTCGTTGGGCTCGAAGAAGATGCAATGAAGGATATCTGACAAGGGGTTGGCACAATTTTTGTAATGCTAGAGAGTTGAAGGGTGGTTGTATTTTGCGTTTTAGTGTCAATGAGTCTGAGAATATTTTTGTTGTTCATGTCAAGGTCATTTCAAATTTGTAG 474 0.3797 MDSGSSTTSTFICRWFQMEYVPDEDFAELPTLYMIEIVYPESPTDYDNGLGVFPFDDIPLMSSNVQFHHVSADKTLSAIVCQRITAGAENVILRDEFDNDFECHIRWARRRCNEGYLTRGWHNFCNARELKGGCILRFSVNESENIFVVHVKVISNL 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00056 157 Gene3D - 54 156 IPR015300 -
Sebi15g00056 157 Pfam B3 DNA binding domain 82 151 IPR003340 GO:0003677
Sebi15g00056 157 SUPERFAMILY DNA-binding pseudobarrel domain 89 150 IPR015300 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00056 Sebi-Chr15 1877458 1878360 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Sebi15g00056 B3 2.4e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00056 - K07192 boe:106330003 42.743