Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00031 ATGGATGGGAAACCTAACCATTTGCTCTCACCCACCTCTTCTTCCTCATCTCTCGATTTTCTCCGCCAAGTCAATGCAGCCCTTGAACGCCACCGCGCTCTCGGTACGACGCAATCAGATAGCATTAGGCCAAAGCGCTCCGCGGTTGCTCAACGGAATGTGGTGAACAAGTGTGAAGAGTTTCCATCGAGTCAGGGTCAGTCAGGGAATGACTCGCTTGCGCTTGGAAAGACCACCGCCTCTGTTGTTGGGGATGAAATGGAGTGGTTGGCAAGCAGCCAACTTGAAGCATCAATTGGATTCAATCAGGACTTGAAGCAACAAAATATTCAGCATGCAGAATCTGAAATAAGTTTGATATCTGAGGGAGGAAAAAGTTGTCTGTTGCCAAAGAGAACAATAGTTACTCAGGATCCTCTGCAGCAATTCCAAAAATTTTTAAGTCAACCAGCTACACAATCCTCAGTAGTGGGACCCTCATGTGTGACAGCTACATCAATCCATTCAACTTCAGCTCCAATGCTGAATACTTTAACTCGTTATTCCCATTCCCATGTGGATAGTGTCTCACATGTGGCTGCAGAACCTTGTGGGAACATTAATGTTAATCCTCATCCAATAACTCAAGAGTTTATTAAAGCACCGAATAATTCCCTAAAAGATACCAACAGAATATCAATTGGTCAGGTAGCAAGTGCAGTCCAAGCTTCCAATTCACTTATTGATGCAGAACTGCCACTTAAGAAGAGCGACCCATCTAAGGAGCAGCAAGGATGCATGTTAAAGGAAACTAGCATTTCAAAATATACTTCTTGTCATGATGACATGTTAACCAAGCAGAAAGACTCTGCAGTCGTTACCAACATACAGCCTCAGGCTCCGTCTTCATCTTCAGATGCAAAGTCAGAATCTTCTAAGTTAGAAAAACCAGAGAAAGCTGCAAGTTGTAAAGGATCATCAGGCACTCGGAAAAGAACCTATGACCCTGATTTGTTTTTTAAAGTCAATGGAAAGCTTTATCAAAGGCTTGGAAAGATAGGCAGTGGTGGAAGCAGTGAGGTACACAAAGTGATTTCATCAGACTGTATGATCTATGCACTTAAAAAGATAAAGCTAAAAGGCCGTGATTATGCCACTGCATATGGATTTTGTCAAGAGATTGAGTATCTTAACAGGCTGAAAGGAAAGAGTAATATTATACAACTTATAGATTATGAGGTTACTGACAAGACTTTGCTTGAGGGAGTCACGAATGGGTCCTTCAATAATAAGGATGGTCGAGTTAAGGATGATGCATATATATACATGGTACTTGAATATGGTGAAATTGATTTGGCTCATATGTTATCTCAGAAATGGAAGCAACTGGATGGATGCAACCAGACCATAGATGAGAACTGGCATCGATTTTATTGGCAGCAAATTCTCCAAGCTGTCAACACAATTCATGAGGAACGTATTGTGCATTCTGACTTGAAGCCAGCTAACTTTCTCCTTGTCAAAGGTTCCCTAAAACTGATTGATTTTGGTATAGCCAAAGCAATAATGAGCGATACAACAAACATCCAACGGGATTCACAGGTTGGTACTCTAAATTATATGTCACCAGAGGCATTTATGTGCAATGAGAGTGATGCAAATGGAAACATCATAAAGTGTGGTCGACCATCAGATATCTGGTCCTTAGGCTGCATCCTTTATCAAATGGTATATGGAAGAACACCGTTTTCAGATTACAAGACATTTTGGGCCAAAGTCAAAGTTATAACTGATCCAAATCATCAAATTACATATGAACCAGTTTCAAACCCATTGCTTCTGGATCTTATGAAAAGGTGTCTAGCATGGGATCGCAATGAAAGGTGGAGAATTCCTCAACTACTCCAACATCCTTTTCTTGCTCCTCCAGTTCCATGTCATTCATCTTTGTACCAAAACCAAGACTTTAAATTGCTGCAAATTATTGCTGAAACTTGTTCACTGGACCCAGAAGCATTGCAGCTATGTTGTCAGCTCCAACAGCTGCTTGGAAATCCCTTCAAGTTAGTAACACCTCACTCATTAAATTCGCGAGACCAACAGCATAAGCTGCTGTCCCGAATATCAGAACTTTGTGTTCAGCTGCAGGAACGATTGACAAATACTGATAAAGAACAATAA 2160 0.412 MDGKPNHLLSPTSSSSSLDFLRQVNAALERHRALGTTQSDSIRPKRSAVAQRNVVNKCEEFPSSQGQSGNDSLALGKTTASVVGDEMEWLASSQLEASIGFNQDLKQQNIQHAESEISLISEGGKSCLLPKRTIVTQDPLQQFQKFLSQPATQSSVVGPSCVTATSIHSTSAPMLNTLTRYSHSHVDSVSHVAAEPCGNINVNPHPITQEFIKAPNNSLKDTNRISIGQVASAVQASNSLIDAELPLKKSDPSKEQQGCMLKETSISKYTSCHDDMLTKQKDSAVVTNIQPQAPSSSSDAKSESSKLEKPEKAASCKGSSGTRKRTYDPDLFFKVNGKLYQRLGKIGSGGSSEVHKVISSDCMIYALKKIKLKGRDYATAYGFCQEIEYLNRLKGKSNIIQLIDYEVTDKTLLEGVTNGSFNNKDGRVKDDAYIYMVLEYGEIDLAHMLSQKWKQLDGCNQTIDENWHRFYWQQILQAVNTIHEERIVHSDLKPANFLLVKGSLKLIDFGIAKAIMSDTTNIQRDSQVGTLNYMSPEAFMCNESDANGNIIKCGRPSDIWSLGCILYQMVYGRTPFSDYKTFWAKVKVITDPNHQITYEPVSNPLLLDLMKRCLAWDRNERWRIPQLLQHPFLAPPVPCHSSLYQNQDFKLLQIIAETCSLDPEALQLCCQLQQLLGNPFKLVTPHSLNSRDQQHKLLSRISELCVQLQERLTNTDKEQ 719
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00031 719 Gene3D Phosphorylase Kinase; domain 1 333 418 - -
Sebi15g00031 719 SUPERFAMILY Protein kinase-like (PK-like) 334 641 IPR011009 -
Sebi15g00031 719 CDD PKc_Mps1 338 633 IPR027084 -
Sebi15g00031 719 ProSitePatterns Serine/Threonine protein kinases active-site signature. 487 499 IPR008271 GO:0004672|GO:0006468
Sebi15g00031 719 Gene3D Transferase(Phosphotransferase) domain 1 454 636 - -
Sebi15g00031 719 SMART serkin_6 340 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi15g00031 719 Pfam Protein kinase domain 340 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi15g00031 719 FunFam serine/threonine-protein kinase mph1 isoform X2 333 420 - -
Sebi15g00031 719 FunFam serine/threonine-protein kinase mph1 isoform X1 454 636 - -
Sebi15g00031 719 ProSitePatterns Protein kinases ATP-binding region signature. 346 368 IPR017441 GO:0005524
Sebi15g00031 719 ProSiteProfiles Protein kinase domain profile. 340 633 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi15g00031 719 PANTHER MIXED LINEAGE PROTEIN KINASE 49 666 - -
Sebi15g00031 719 MobiDBLite consensus disorder prediction 290 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00031 Sebi-Chr15 1005442 1011830 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi15g00031 346 633 MAP Kinase Kinase Kinase AT4G08470 29.452 2.56e-23 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TTK Sebi15g00031 Pkinase 3.4e-55 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00031 K08866 - gmx:100816674 1092.41