Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00029 ATGGAAACTGGTTCTTCCTCGGCTTTGTTCTTCTTGCGTGAAATCGGTGAAGATTCCACCACAAAACTCGAGTGGAAATCATCTTCAGATCCTTTCATTTTTGGGGATTTTGATTTTCAGAGAATGAAGGATTCAGTAATGATTGTAGGATCTGGCCAATGTAGGAATCAAATCGATTCCGATTTTATTAATAATATGGCTAGGAAAGGTGAGGGTTCAACAATCAGAATCGTTTTGAGAACGACTTACTCTTGCTTTGGTGTTTGGCAGCACGATCATGTTCAAATTATCGTCAACGATCAGGATAACAGAACCACTCCATCCTATGTGGCTTTCACTGACACAGAGCGCTTGATCGGTGATGCAACCAAGAACCAAGTCATTATGTACCCAACCAACACTGTTTTTGATGCTAAGCATTTGATCGGAAGGCGTTTTAGCGATTCTTCGGGGGAGGGGGAGCAATTTTCTACAGAAGAGATATTTTCCATGGTTCTTATGAAGATGAAGGAGATTGCAGAGGCGTATCTAGGTTCCACGGTGAAGAATGTTGTAGTCACTGTTCCCGCTTACTTCAATGACTCATAG 588 0.4184 METGSSSALFFLREIGEDSTTKLEWKSSSDPFIFGDFDFQRMKDSVMIVGSGQCRNQIDSDFINNMARKGEGSTIRIVLRTTYSCFGVWQHDHVQIIVNDQDNRTTPSYVAFTDTERLIGDATKNQVIMYPTNTVFDAKHLIGRRFSDSSGEGEQFSTEEIFSMVLMKMKEIAEAYLGSTVKNVVVTVPAYFNDS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00029 195 Gene3D - 151 195 - -
Sebi15g00029 195 SUPERFAMILY Actin-like ATPase domain 81 194 IPR043129 -
Sebi15g00029 195 Gene3D - 62 150 - -
Sebi15g00029 195 Pfam Hsp70 protein 77 150 IPR013126 GO:0005524|GO:0140662
Sebi15g00029 195 Pfam Hsp70 protein 152 195 IPR013126 GO:0005524|GO:0140662
Sebi15g00029 195 PRINTS 70kDa heat shock protein signature 184 195 - -
Sebi15g00029 195 PRINTS 70kDa heat shock protein signature 73 86 - -
Sebi15g00029 195 PRINTS 70kDa heat shock protein signature 101 113 - -
Sebi15g00029 195 PRINTS 70kDa heat shock protein signature 123 131 - -
Sebi15g00029 195 FunFam heat shock 70 kDa protein-like 68 195 - -
Sebi15g00029 195 PANTHER HEAT SHOCK PROTEIN 70KDA 75 195 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00029 Sebi-Chr15 938043 938710 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi15g00029 66 195 Calmodulin-binding Proteins AT1G56410 64.968 7.26e-62 200
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00029 K03283 - apan:127251995 199.904