Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi15g00013 ATGAAAAAACACAGCAACCCCGACTCCGCTTGGATCATCGTCCACGGCCACGTCTACGACTGCACCCGCTTCCTCAAAGACCATCCCGGCGGCGAGCATCCTCATCAACGCGGCACCGACTGCACGGAGGAGTTCGAGGCAATCCATTCCGATAAAGCAAAGAAAATGCTCGAAGATTATAGAATCGGTGAACTCATAACCACAGGCTACAACTCAGACTCATCTCCCAATAACTCCCTCCATGGAAATTCCGAAATTACCCCTCACTTAGCCCCTATCAAAGAAATCATCACAATACCCACACGCAGCGTGGCTCTTAACCCACGCGAGAAAATCCCATGCAAGCTTGTCTCCAAAATCTCCATCTCTCACGACGTTAGGATCTTCCGTTTTGCATTGCCTTCGGAGGATCAACTCTTGGGGTTACCCGTAGGGCACATTTTCCTATGTGCCGCAATTGACGGGAAGTTATGCATGCGAGCTTACACGCCAACAAGCGGCGTTGATGAGATTGGATTTTTTGAGTTAGTTGTGAAGGTTTATTTCAAAGGCGCACCCCAAGTTTCCCAACGGTGGACTCATGTCACAGCATTTGGACTCGTTGCCTATTGGTCAGTATTGGACGTGAAAGGCCCATTGGGCCATATAGAGTACAATGGGAGAGGGAACTTTTTGGTTCACGGGAAGCAAAGATTTGCGAAGAGGCTTGCCATGTTGGCTGGTGGGACCGGGATCACACCGATTTACCAGGTGGCACAAGCGATTCTGAAGGACCCAGAGGATCGCACTGAAATGCATAGCTTGATGAGTGGGCGAAGAAGTATGGTGATAGGTTCAAGGTGTGGTATGTGGTGGAGAGTGCGAAGGATGGTGTGGGAATACAGTGTGGGGTTCATCACGGAGAGTATCATGAGGGCGCATGTTCCTGAGGCTGGAGAGGATACGTTGGCTTTGACTTGTGGCCCACCACCTATGATTCAGTTTGCGGTTCAGCCTAATTTGGAGAAGATGGGGTATGACGTCAAGAATGATTTGCTAGTGTTTTAG 1047 0.4976 MKKHSNPDSAWIIVHGHVYDCTRFLKDHPGGEHPHQRGTDCTEEFEAIHSDKAKKMLEDYRIGELITTGYNSDSSPNNSLHGNSEITPHLAPIKEIITIPTRSVALNPREKIPCKLVSKISISHDVRIFRFALPSEDQLLGLPVGHIFLCAAIDGKLCMRAYTPTSGVDEIGFFELVVKVYFKGAPQVSQRWTHVTAFGLVAYWSVLDVKGPLGHIEYNGRGNFLVHGKQRFAKRLAMLAGGTGITPIYQVAQAILKDPEDRTEMHSLMSGRRSMVIGSRCGMWWRVRRMVWEYSVGFITESIMRAHVPEAGEDTLALTCGPPPMIQFAVQPNLEKMGYDVKNDLLVF 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi15g00013 348 PANTHER NADH-CYTOCHROME B5 REDUCTASE 2 344 IPR001834 GO:0016491
Sebi15g00013 348 ProSiteProfiles Ferredoxin reductase-type FAD binding domain profile. 109 219 IPR017927 GO:0016491
Sebi15g00013 348 Gene3D - 283 348 IPR039261 -
Sebi15g00013 348 Gene3D - 214 278 IPR039261 -
Sebi15g00013 348 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 237 256 IPR001709 GO:0016491
Sebi15g00013 348 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 160 167 IPR001709 GO:0016491
Sebi15g00013 348 PRINTS Flavoprotein pyridine nucleotide cytochrome reductase signature 271 280 IPR001709 GO:0016491
Sebi15g00013 348 Pfam Cytochrome b5-like Heme/Steroid binding domain 2 65 IPR001199 -
Sebi15g00013 348 CDD cyt_b5_reduct_like 114 343 - -
Sebi15g00013 348 PRINTS Cytochrome B5 reductase signature 204 218 - -
Sebi15g00013 348 PRINTS Cytochrome B5 reductase signature 237 256 - -
Sebi15g00013 348 PRINTS Cytochrome B5 reductase signature 140 151 - -
Sebi15g00013 348 PRINTS Cytochrome B5 reductase signature 160 167 - -
Sebi15g00013 348 SMART Cyt_b5_2 1 66 IPR001199 -
Sebi15g00013 348 ProSiteProfiles Cytochrome b5 family, heme-binding domain profile. 1 66 IPR001199 -
Sebi15g00013 348 Gene3D Translation factors 101 202 - -
Sebi15g00013 348 PRINTS Cytochrome B5 signature 18 28 IPR001199 -
Sebi15g00013 348 PRINTS Cytochrome B5 signature 53 65 IPR001199 -
Sebi15g00013 348 PRINTS Cytochrome B5 signature 41 48 IPR001199 -
Sebi15g00013 348 SUPERFAMILY Cytochrome b5-like heme/steroid binding domain 2 73 IPR036400 -
Sebi15g00013 348 ProSitePatterns Cytochrome b5 family, heme-binding domain signature. 24 31 IPR018506 GO:0020037
Sebi15g00013 348 SUPERFAMILY Ferredoxin reductase-like, C-terminal NADP-linked domain 206 342 IPR039261 -
Sebi15g00013 348 Pfam Oxidoreductase FAD-binding domain 114 218 IPR008333 -
Sebi15g00013 348 SUPERFAMILY Riboflavin synthase domain-like 102 218 IPR017938 -
Sebi15g00013 348 Pfam Oxidoreductase NAD-binding domain 238 330 IPR001433 GO:0016491
Sebi15g00013 348 Gene3D - 1 65 IPR036400 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi15g00013 Sebi-Chr15 444626 445717 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi15g00013 102 339 NADPH P450 reductases AT5G17770 34.510 2.73e-36 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi15g00013 K10534 - gmx:100813471 521.931