Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00137 ATGGATAACGAGGTGCTAGAATTTGATATTGGGCTGGGGGGAGGCGAGGGAGAATACGACGACGATGGAGGGGAAATAGAACACCCTATTGATGAGGAGGAATTGGCTGATAGCAGTGGTGTAGCCACTGGTGGTGGTGAAATTTATTTTCCCGAGGGGGACCTCTTAGATCTTGAACCTTACGAGGGCATGGAATTCGAGTCTGAGGAGGCTGCCAAGGCCTTCTATAATTCCTATGCTCGTCGTGTTGGGTTTAGTACTCGTGTCAGCTCATCCCGTCGTTCCAGGCGCGATGGAGCTATTATACAGAGGCAATTTGTTTGCGCAAAGGAAGGGTTCCGCAACTTGAATGAGAAACGCACCAAAGATAGAGAGATCAAGCGCCCTCGAACCATTACCAGAGTGGGATGCAAAGCGTCCTTGTCTGTCAAAATGCAAGATTCTGGAAAGTGGATCGTATCTGGGTTTGTTAGAGAACATAATCACGAACTGGTTCCACCAGATCAGGTGCATTGTCTTCGCTCTCACAGGCAAATATCAGGAGCGGCCAAGACGCTGATTGATACTTTACAGGCTGCTGGGATGGGTCCTCGTAGAATCATGTCAGCACTCATCAAAGAGTATGGTGGGATTAGCAAAGTCGGGTTTACAGAGGTTGACTGTAGGAATTACATGAGGAATAATCGGCAGAGAAGTTTAGAAGGGGACATTCAACTTGTTCTGGATTATTTGAGACAAATGCATGCCCAAAACCCTAATTTCTTCTATGCTGTGCAAGAAGTGAGAGCAGATTATGACACAATGAATACTTTGCCAGTATTGAGGACCCCATCTCCAATGGAGAAGCAAGCATCTGAGCTGTACACAAGAAAAATTTTCATGAGGTTCCAAGAGGAGTTAGTTGGGACACTAACATTCATGGCATCCAAAGCTGAAGAAGATGGGGAGGTCATTACATATCATGTAGCTAAATTTGGGGAGGACCATAAAGCATACTACGTTAAATTCAATGTTTTGGAGATGAAAGCCACTTGTAGTTGCCAAATGTTTGAGTTTTCTGGCCTTCTTTGCAGACATGTTTTGGCAGTCTTTAGAGTTACCAATGTCCTTACTCTCCCATCTCATTATATATTGAAACGTTGGACAAAAAATGCCAAGAGCAATGTAATATTAGAAGAACATTCTTGTGATTTATACACTCACTATTTGGAATCTCATACAGTTAGATATAACACCCTCCGACATGAGGCCTTTAAATTTGTTGACAAAGGTGCAAGCTGTCCTGAAACTTACGATGTTGCAATGGATGCTTTACAAGAAGCTGCAAAAAGAGTTGCTCTGGTAATGCAAAACAAGGGGAGAATTCCTGTCAGCAATGGAAAGGTTAGGAGTCGCTTGCTGAATGATGAAAGTCATACTAATTACTCAAGTGGATACCAGGAAGAAAGCTTGGGTCAGCATATGTCTAAGGATGATATGGATAAGCATATCAGAAAACTTATGAATGAGCTTGAGTGTGCAAATCGGAAGTGTGAAATTTACCGGTCCAACCTGCTCTCAGTTTTGAAAGCTGTTGAGGATCACAAGTTAGAGTTGTCAGTTAAGGTGGAAAACATCAAGATAAGCATGAAAGATGGCTTCTGA 1644 0.4313 MDNEVLEFDIGLGGGEGEYDDDGGEIEHPIDEEELADSSGVATGGGEIYFPEGDLLDLEPYEGMEFESEEAAKAFYNSYARRVGFSTRVSSSRRSRRDGAIIQRQFVCAKEGFRNLNEKRTKDREIKRPRTITRVGCKASLSVKMQDSGKWIVSGFVREHNHELVPPDQVHCLRSHRQISGAAKTLIDTLQAAGMGPRRIMSALIKEYGGISKVGFTEVDCRNYMRNNRQRSLEGDIQLVLDYLRQMHAQNPNFFYAVQEVRADYDTMNTLPVLRTPSPMEKQASELYTRKIFMRFQEELVGTLTFMASKAEEDGEVITYHVAKFGEDHKAYYVKFNVLEMKATCSCQMFEFSGLLCRHVLAVFRVTNVLTLPSHYILKRWTKNAKSNVILEEHSCDLYTHYLESHTVRYNTLRHEAFKFVDKGASCPETYDVAMDALQEAAKRVALVMQNKGRIPVSNGKVRSRLLNDESHTNYSSGYQEESLGQHMSKDDMDKHIRKLMNELECANRKCEIYRSNLLSVLKAVEDHKLELSVKVENIKISMKDGF 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00137 547 SMART 26again6 343 370 IPR006564 GO:0008270
Sebi159g00137 547 Pfam SWIM zinc finger 320 366 IPR007527 GO:0008270
Sebi159g00137 547 ProSiteProfiles Zinc finger SWIM-type profile. 332 368 IPR007527 GO:0008270
Sebi159g00137 547 Coils Coil 490 517 - -
Sebi159g00137 547 PANTHER OS01G0519700 PROTEIN 49 259 - -
Sebi159g00137 547 Pfam FAR1 DNA-binding domain 75 166 IPR004330 -
Sebi159g00137 547 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00137 Sebi-Chr159 1501722 1507155 Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi159g00137 FAR1 4.2e-34 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi159g00137 - - gmx:100793442 524.242