Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00128 ATGGGAATTTGCTGGGGTTCTCCACCTCACGACCCAACCCCAACGGGAACCGCTACACCGGCGACATCCCTGTCCCAGGCCCAGTCCCAGTCCCAGACGACCAACAGCAGCTATACTACTAGTACTACTTCTTCTGGAAGTGGGACCAGTTCCATAAATAGCAAGTTCTCGGTGTCAAGTGGTGACGAAACTTATCCCGGTGGTCAGATTCTAGCTACCTCTAATTTGAGGATCTTCACTTTTGCGGAGTTGAAGGCCGCAACTAGGAATTTCAGAGCTGATACACTACTTGGGGAGGGTGGTTTTGGAAAAGTCTACAAGGGTTGGCTTGAAGAGAGGGCCTCGTCAAAGAGTGGAAGTGGAACAGTCATTGCCGTGAAAAAATTGAACTCCGAAAGCTTACAAGGAATTGAGGAGTGGCAGTCAGAAGTACATTTTCTTGGACGCCTTTCTCATCCTAACCTGGTTAAGCTGTTGGGATACTGCTTGGAGGAAACAGAGCTTCTACTTGTATATGAATTCATGCAGAAGGGCAGTCTGGAAAATCATCTATTTGGAAGAGGCTCTGCTGTTCAACCTCTTCCTTGGGAAATCAGGCTTAAGATTGCAATTGGAGCAGCTCGTGGCCTTGCATTCTTGCATACATCTGAGAAAGTAATTTACAGAGACTTCAAGGCCTCCAATATATTGCTTGATGGGTCGTATAATGCAAAGATATCAGACTTTGGCTTGGCAAAACTGGGTCCTTCTGCTAGTCAATCCCATGTGACAACAAGGGTGATGGGCACATATGGTTATGCAGCTCCTGAATATGTGGCCACAGGGCATCTATATGTAAAGAGCGACGTGTATGGGTTTGGAGTTGTTTTGGTTGAGATCCTAACTGGCCTACGAGCGCTTGATCCCAACCGTCCAAGTGGGCAACATAATCTAACAGATTGGGTCAAACCATACCTACAAGATAGAAGAAAATTGAAGAGCATAATGGATTCTCGATTGGAAGGAAAATATCCATCCAAAGCTGCTTTTCGTATAGCTCAGCTTGCTTTAAATTGTCTTGCAGCTGAGCCCAAACATCGGCCATCAATGAAGGAAGTTTTGGAGAGCTTGGAGCGAATTCAAGCTGCCAATGAGAAACCTGTGGAGCCCAAGTTCCGCTCTACCCACTCCCATGCTTCCCAACAGGCTGTACACCACCGTTCTCCACTTCATCCAAATCCAAGGCATGATCGTTCATGA 1239 0.4673 MGICWGSPPHDPTPTGTATPATSLSQAQSQSQTTNSSYTTSTTSSGSGTSSINSKFSVSSGDETYPGGQILATSNLRIFTFAELKAATRNFRADTLLGEGGFGKVYKGWLEERASSKSGSGTVIAVKKLNSESLQGIEEWQSEVHFLGRLSHPNLVKLLGYCLEETELLLVYEFMQKGSLENHLFGRGSAVQPLPWEIRLKIAIGAARGLAFLHTSEKVIYRDFKASNILLDGSYNAKISDFGLAKLGPSASQSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLVEILTGLRALDPNRPSGQHNLTDWVKPYLQDRRKLKSIMDSRLEGKYPSKAAFRIAQLALNCLAAEPKHRPSMKEVLESLERIQAANEKPVEPKFRSTHSHASQQAVHHRSPLHPNPRHDRS 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00128 412 Pfam Protein tyrosine and serine/threonine kinase 94 370 IPR001245 GO:0004672|GO:0006468
Sebi159g00128 412 MobiDBLite consensus disorder prediction 1 58 - -
Sebi159g00128 412 ProSitePatterns Protein kinases ATP-binding region signature. 97 128 IPR017441 GO:0005524
Sebi159g00128 412 SUPERFAMILY Protein kinase-like (PK-like) 75 399 IPR011009 -
Sebi159g00128 412 FunFam Serine/threonine-protein kinase BIK1 58 174 - -
Sebi159g00128 412 PANTHER OS01G0588500 PROTEIN-RELATED 35 374 - -
Sebi159g00128 412 CDD STKc_IRAK 97 373 - -
Sebi159g00128 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 219 231 IPR008271 GO:0004672|GO:0006468
Sebi159g00128 412 Gene3D Transferase(Phosphotransferase) domain 1 175 397 - -
Sebi159g00128 412 ProSiteProfiles Protein kinase domain profile. 91 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi159g00128 412 FunFam Serine/threonine-protein kinase PBS1 175 389 - -
Sebi159g00128 412 MobiDBLite consensus disorder prediction 377 412 - -
Sebi159g00128 412 MobiDBLite consensus disorder prediction 16 58 - -
Sebi159g00128 412 Gene3D Phosphorylase Kinase; domain 1 75 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00128 Sebi-Chr159 1383847 1386797 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi159g00128 67 378 Receptor kinase-like Gene Family AT4G02010 50.000 1.23e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Sebi159g00128 PK_Tyr_Ser-Thr 2.1e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi159g00128 - - gmx:100305417 661.759