Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00105 ATGATTGTGTGTATTTTGATGCTTTACTTCCTTTGGATTAAGGGCGGTCGGATTGAAGCAACTGTTGGGAAGCAGTTCATAAGGAAATTTGATAGCTGTGTGGTTGAGGGAGAGGTCTATAAGGTGACTGATTTTGCAATCATCAAGAACCTTGGAAAGTTTAGAGCAACGAGCCATGGTTTCAAGCTGGTTTTCAATGCCACCACCAAATTGTTACCCACACTGGTTGGAAGTATCCCATTTCATGGGCTCTCATTCCTCAAGACCTCCGATATCATGAAAACAAAGGGCCATTCAGACTACCTATTGGATTATATGGGGATCTTGACAGCAGTATCTGATGAGATGACAATGACCTCAAGAGATGGACGAGAGGCTAGGTTGATGCAGTTGGAACTGGGGGAGATAAGGTGTGCAATCTTTCCTGAAGAAATCTCCATGTTGGTTGGGAAGGAGGTTTTATTCAAGGTGGAGAAGACAGCTGAAGCTTCTTCCAACTTTGATGGCTCTCTAAAATTAAGAGGGTTTGCTCAGACCCTCTATTGA 546 0.4341 MIVCILMLYFLWIKGGRIEATVGKQFIRKFDSCVVEGEVYKVTDFAIIKNLGKFRATSHGFKLVFNATTKLLPTLVGSIPFHGLSFLKTSDIMKTKGHSDYLLDYMGILTAVSDEMTMTSRDGREARLMQLELGEIRCAIFPEEISMLVGKEVLFKVEKTAEASSNFDGSLKLRGFAQTLY 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00105 181 SUPERFAMILY Nucleic acid-binding proteins 15 73 IPR012340 -
Sebi159g00105 181 Gene3D - 14 73 IPR012340 -
Sebi159g00105 181 CDD RPA1_DBD_A_like 14 70 - -
Sebi159g00105 181 Pfam Domain of unknown function DUF223 14 74 IPR003871 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00105 Sebi-Chr159 1112163 1112920 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi159g00105 15 135 Core DNA Replication Machinery Family AT2G06510 24.390 4.75e-06 44.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi159g00105 - K07904 tpra:123904230 87.8113