Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00103 ATGGCTACACAAGCTCTGGTATCTTCATCATCTCTTACCTTCTCAGCTGAGGCTGCCAAACAGAGTCTTGGAGCAAGATCACTCCAATCTCCAATTGGGTTCTCCAAAAAATGTTCCTTTATTGTCAAGGCAGCTTCTACTCCTCCTGTCAAGCAAGGAGCAAATAGACCCTTGTGCCTCCCCGGTGACTATGGATTTGACCCTCTTGGACTTTCAGATCCTGAAGGAACAGGAGGGTTCATTGAGCCAAAATGGCTAGCATATGGTGAGATCATCAATGGTCGTTTTGCAATGTTGGGTGCAGCTGGTGCTATTGCACCTGAAATTCTTGGCAAGGCTGGTCTGATTCCAGAGGAAACAGCACTCCCATGGTTCAAAACCGGTGTGATTCCACCTGCAGGAACATACAGCTACTGGGCAGACCCTTACACACTGTTTGTGTTGGAGATGGCACTGATGGGATTTGCAGAGCACAGGAGATTCCAAGATTGGGCCAAACCAGGGTCTATGGGGAAGCAATACTTCTTAGGACTAGAGAAAGGTCTTGGAGGTTCAGGTGACCCAGCTTACCCTGGTGGACCTTTCTTTAACCTCTTGGTTTGGTAA 606 0.4802 MATQALVSSSSLTFSAEAAKQSLGARSLQSPIGFSKKCSFIVKAASTPPVKQGANRPLCLPGDYGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPEETALPWFKTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKGLGGSGDPAYPGGPFFNLLVW 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00103 201 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 11 199 IPR001344 GO:0009765|GO:0016020
Sebi159g00103 201 SUPERFAMILY Chlorophyll a-b binding protein 58 199 - -
Sebi159g00103 201 Pfam Chlorophyll A-B binding protein 60 200 IPR022796 -
Sebi159g00103 201 Gene3D Chlorophyll a/b binding protein domain 58 201 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00103 Sebi-Chr159 1100850 1101922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi159g00103 19 199 Chloroplast and Mitochondria Gene Families AT1G61520 78.866 3.69e-105 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi159g00103 K08909 - gmx:100808379 365.54