Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00084 ATGGAGGGTGAGAATCAGGTAAATGATGCAAAAAACAAGCAAGTATCTGATGAAGAAGCTTTCCTATATGCCATGGAATTAGCAGGGGCCTCTGCTGTCCCTATGGTTCTCAAGTCAGCTTTGGAGCTTGGAGTCATTGAAACTATAGCAAAGGCTGGCCCTGGAGCTTACCTTTCCCCTTCTCACATAGCTTCTCAGCTTCCATCAATAAAGAATCCAGAAGCACCTGCTATGTTGGATCGCTTGTTGCGCTTATTGGCTAGCTACAACATCCTCACATATTCCCTCATCACTCATACTCATGGAGATAGAGATGCTGAAAGACACTATGGTCTTAGCCCTTATGCCAAATACTTTGTCAACAACCAAGATGTTGAGGAGGGTGGTCTTCCATTTAACAATGCTTATGGGATGACTGCCTTTGAATTTCATGGGACAAATCCAAGGTTCAACAAGCTTTTCAACAAGGGGATGTCAGATTGCTCAAGCATCATAATGAATAAAGTTCTTGAGACCTATAAAGGCTTTGAGGGTCTTGGATCTGTGGTTGATGTTGGTGGTGGGACTGGAACTATCATTAACATGATTGTCTCTAAGTATCCCACCATAAAGGGCATTAATTTTGACTTGCCTCATGTCATTAAAGAAGCTCCATCTTATCCAGGTGTGGAGCATGTTGGTGGAGACATGTTTGTCAGTATTCCAAAAGGTGATGCCATTTTCATGAAGTGGATATGTCATGACTGGAATGATGAGGAATGCTTGAAATTTTTGAAGAATTGCTATGATTCCCTGCCTGAGACAGGGAAGGTGATTTTGGTTGAATGCATTATTCCAGTAGTCCCAGACTCTAAGCTGGCCTCAAGGTGTGTGTTTGAAATGGATGTTATTATGTTGTGTCATAGCTCAGGTGGAAGAGAGAGAACAGAGAAAGAGTATGAGGCATTGGCTAAGGGGGCTGGATTCCAAGGTTTCCAAGTAGCAGGCTGTGCTTTCAACATGTATGTCATGGAGTTTCTTAAGAAGCCTTAG 1032 0.4273 MEGENQVNDAKNKQVSDEEAFLYAMELAGASAVPMVLKSALELGVIETIAKAGPGAYLSPSHIASQLPSIKNPEAPAMLDRLLRLLASYNILTYSLITHTHGDRDAERHYGLSPYAKYFVNNQDVEEGGLPFNNAYGMTAFEFHGTNPRFNKLFNKGMSDCSSIIMNKVLETYKGFEGLGSVVDVGGGTGTIINMIVSKYPTIKGINFDLPHVIKEAPSYPGVEHVGGDMFVSIPKGDAIFMKWICHDWNDEECLKFLKNCYDSLPETGKVILVECIIPVVPDSKLASRCVFEMDVIMLCHSSGGRERTEKEYEALAKGAGFQGFQVAGCAFNMYVMEFLKKP 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00084 343 SUPERFAMILY "Winged helix" DNA-binding domain 16 122 IPR036390 -
Sebi159g00084 343 PIRSF O-mtase 1 127 IPR016461 GO:0008168
Sebi159g00084 343 PIRSF O-mtase 122 341 IPR016461 GO:0008168
Sebi159g00084 343 CDD AdoMet_MTases 182 274 - -
Sebi159g00084 343 Gene3D - 3 116 IPR036388 -
Sebi159g00084 343 Pfam Dimerisation domain 35 87 IPR012967 GO:0046983
Sebi159g00084 343 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 25 341 IPR016461 GO:0008168
Sebi159g00084 343 FunFam Caffeic acid O-methyltransferase 115 341 - -
Sebi159g00084 343 Gene3D Vaccinia Virus protein VP39 117 341 IPR029063 -
Sebi159g00084 343 FunFam Caffeic acid 3-O-methyltransferase 2 119 - -
Sebi159g00084 343 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 125 338 IPR029063 -
Sebi159g00084 343 Pfam O-methyltransferase domain 125 323 IPR001077 GO:0008171
Sebi159g00084 343 PANTHER O-METHYLTRANSFERASE 24 325 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00084 Sebi-Chr159 963825 966133 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi159g00084 14 342 Monolignol Biosynthesis Gene Families AT5G54160 60.282 2.77e-153 433
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi159g00084 K13066 - gmx:100780100 489.96