Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00063 ATGGTTTCTTCAGACGAAAGTGCTGATCACAATGTTTCTTCTGATGATAAAGTACAGCAGGGAGTGAGTCCTCATAGCGATATTAAATTGTCACAAGGGATTCATGAAACTAAAATTCATTTGTCCAAATCAGAGAGGGCAAGAACTATTCCTTCTATTGTAGCTAAAAAACAAGTGAAGGATTCTGATGCTACTGCTCATGCCTTGCAATCAGAAACATTTGAGAAACATTTGCAGAGTCCTGATACTCTTTCACATGAATTGCCTACTTTGCAATCTGGTCAGGACAGTCCCTCTATAATACGTGAAAAGGTATCAAAAGATGGCTATAACTGGCGGAAATATGGCCAGAAACATGTTAAGGGGAATGAATTTATAAGGAGCTATTACAAGTGTACACATCCTAACTGCCAAGCTAAAAAACAATTGCAGCAGTTAAATAATGGGCACATTACAGATTCTATTTGCATCGGTCAGCATAATCATCCTAGACCTCAATCAAACAACATACCACCACTTGATTCTGTTCTGCCTGTTGTTGAACAAGGACCACACAAACCCTCTTTAGCCAATGTGGAAGACAAATCATTTGTTGAGCATGGATGTATGCCTCTACAGATCAAACCTTTAGATTCTCTTCCAGCTTCAAAAGTTTCCCCAGCTGATGAGTTGAAAGCAGCAGATTTACAACTGACAGTAAAGGATGAGGTTCACAACAATGAAGATCCTGAGCCAAAGCGGCTGAAGAAAGACAATAGTAATGCTGATATCACTAGAACTGATGTGTCAACTCGTGAATCTCGTGTTGTTGTTCAGACTTCAAGTATGGTTGATTTTGTAAATGATGGGTATCGCTGGCGCAAATATGGGCAGAAACTAGTTAAAGGGAATACAAATCCAAGAAGTTATTATCGATGCTCAAATCCTGGATGCCCTGCCAAAAAGCATGTGGAAAGGGCCTCTCATGATTCAAAAATTGTAATAACAACCTATGAGGGACAACATGATCATGAAATCCCCCCTGGAAGGACTGTCACTCATAATGCAGCTACAAATACTCACACAATGGCCACCGATGGCAAGCTGGGAACCAAATCTGGAGGTAATAATACAGGGGAACGCAGCTGCTTGGACTCAAAAAGCAGATCAAATGAGCAACTAAATAAGGAGTCAATTACTAAATCAAAGGATGGTGATATGGCTGAGTTTGGTATGATCAGCCTTTGTGATGAGGGTCCTGAAAGTAAATTAAGCGAGAAAGAACAAAAAGTGATGACTCAGGTACCAAAGACGATTCTATCAGCAATGACATCATATGCCATTCAGGTTCCAAAGTTCCTTGTAGATCAAATGAACAGCTGA 1362 0.4009 MVSSDESADHNVSSDDKVQQGVSPHSDIKLSQGIHETKIHLSKSERARTIPSIVAKKQVKDSDATAHALQSETFEKHLQSPDTLSHELPTLQSGQDSPSIIREKVSKDGYNWRKYGQKHVKGNEFIRSYYKCTHPNCQAKKQLQQLNNGHITDSICIGQHNHPRPQSNNIPPLDSVLPVVEQGPHKPSLANVEDKSFVEHGCMPLQIKPLDSLPASKVSPADELKAADLQLTVKDEVHNNEDPEPKRLKKDNSNADITRTDVSTRESRVVVQTSSMVDFVNDGYRWRKYGQKLVKGNTNPRSYYRCSNPGCPAKKHVERASHDSKIVITTYEGQHDHEIPPGRTVTHNAATNTHTMATDGKLGTKSGGNNTGERSCLDSKSRSNEQLNKESITKSKDGDMAEFGMISLCDEGPESKLSEKEQKVMTQVPKTILSAMTSYAIQVPKFLVDQMNS 453
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00063 453 ProSiteProfiles WRKY domain profile. 101 165 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 MobiDBLite consensus disorder prediction 76 99 - -
Sebi159g00063 453 FunFam WRKY transcription factor 95 166 - -
Sebi159g00063 453 SUPERFAMILY WRKY DNA-binding domain 274 340 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 MobiDBLite consensus disorder prediction 1 27 - -
Sebi159g00063 453 SUPERFAMILY WRKY DNA-binding domain 102 165 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 Pfam WRKY DNA -binding domain 281 338 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 Pfam WRKY DNA -binding domain 107 163 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 Gene3D WRKY domain 98 166 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 SMART WRKY_cls 280 339 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 SMART WRKY_cls 106 164 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 MobiDBLite consensus disorder prediction 31 45 - -
Sebi159g00063 453 ProSiteProfiles WRKY domain profile. 275 340 IPR003657 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 66 371 IPR044810 GO:0003700
Sebi159g00063 453 MobiDBLite consensus disorder prediction 355 397 - -
Sebi159g00063 453 FunFam WRKY transcription factor 57 266 340 - -
Sebi159g00063 453 MobiDBLite consensus disorder prediction 238 256 - -
Sebi159g00063 453 Gene3D WRKY domain 267 333 IPR036576 GO:0003700|GO:0006355|GO:0043565
Sebi159g00063 453 MobiDBLite consensus disorder prediction 238 261 - -
Sebi159g00063 453 MobiDBLite consensus disorder prediction 355 377 - -
Sebi159g00063 453 MobiDBLite consensus disorder prediction 378 397 - -
Sebi159g00063 453 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00063 Sebi-Chr159 732568 734815 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi159g00063 90 348 WRKY Transcription Factor Family AT2G04880 48.519 7.31e-84 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Sebi159g00063 WRKY 1.3e-25 CL0274