LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Sebi159g00047	ATGAATGAGGTCTGGCCTGAACCTGTTGTGGAATTATTAGCCACCCATGTTGCTATCCATGCTGCTCACTACCATGGTCCTCTTGCTGCTGCTTCTGCACTTGCCATTGTTTTTCAGGTTTGTTCAACATGGCGAGAAGTGTCACGCTCTGAACTGCTTTGGCAGCGGCTCACACGACAGATCTGGCGCGTGACACATCGACTGAGGGACACGTGGCATCTGGAGTATATCTTCTGGCATCGAACGGCCAGGAACTTCAGCACTGGGAGACACTCATTTGTGGTGCCTGATTTTGATCCTTCCGACACGCGCGGAGATCACCACCACCTCCCAACACTTATTTGCAGATGCCTCACACTCTCAGACACTCACCTTGCTTGTGGTTTTGTGGATGGCACTGTTCGTTTATTTGACTTGGAGACTAACCTCCATGTTAGCACCTTTTGGTCTAGCCATGGTCATCTTTTTGGCCCATTTTCACTTGCTGTATCAGGCATTGTTATTACCGACTCAGTTCTCACCTTTGCTAGACTGGATGGTGACATCTATGTGGCAATCATAAATGGGCCCAATCCAGCCCGTCGGGCTCTCCCTGGGGACGTGGTAAATAACGGCGTGTTGGTGGAATTCGCGGGCTCCAGTAGATGGTGGGTGGGCCTGTTCGCGGGCCATGCTGGTGGGTCTTTTCAGATATGGGATGCCCACACTGAACAGCGCGTGTTTGTTGGAGGTTCGTTGACTGACCCTGAATCTGTCCTTGGCTGGCACATGTTGACTGAGTTAACTGAACCCGTGGGCCGAGTCCGGGTCACAGAACAGGAGTTTGTTGTAGCGTGCACAGGTTCAAGGCTGGTTTGTTTTGAATTGAGTAACCCTGAGGTTTTGTTGCGTGATGTAGGGTCGAGTGCTGGGTTTGTGGTGAGTTCTATGGACGTAAGTCATGAGAATTTGGTAGTAGTGGAAAGAAATGGTGTGGGAACAGTACGGCGCGTGAACACATTTGAGCGCGTGAGCAGGTTTAGGATGAGGGGTGCATGGTTGAGGGGTTTGTTGGGGTGCATGAACCTTGGGTACGTTGTAACTTATTCTGGTGGAGGAGGTTTGTTGAGAGTGTGGGACATACACCACCCAAATGGAAGATTGTGTGTCACACTTGCAATTAGAGGAGGGGAGGGACAGGCAAATAGCTTGGTGGCTAATCAAACACATGTGGCTATCTCCTCTAATGACACTTCCATACACTTATTGAATTTTAGTGTACAACAATAG	1269	0.4988	MNEVWPEPVVELLATHVAIHAAHYHGPLAAASALAIVFQVCSTWREVSRSELLWQRLTRQIWRVTHRLRDTWHLEYIFWHRTARNFSTGRHSFVVPDFDPSDTRGDHHHLPTLICRCLTLSDTHLACGFVDGTVRLFDLETNLHVSTFWSSHGHLFGPFSLAVSGIVITDSVLTFARLDGDIYVAIINGPNPARRALPGDVVNNGVLVEFAGSSRWWVGLFAGHAGGSFQIWDAHTEQRVFVGGSLTDPESVLGWHMLTELTEPVGRVRVTEQEFVVACTGSRLVCFELSNPEVLLRDVGSSAGFVVSSMDVSHENLVVVERNGVGTVRRVNTFERVSRFRMRGAWLRGLLGCMNLGYVVTYSGGGGLLRVWDIHHPNGRLCVTLAIRGGEGQANSLVANQTHVAISSNDTSIHLLNFSVQQ	422

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Sebi159g00047	422	SUPERFAMILY	F-box domain	34	87	IPR036047	GO:0005515
	Sebi159g00047	422	PANTHER	WD40 REPEAT PROTEIN 12, 37	38	386	-	-
	Sebi159g00047	422	SUPERFAMILY	WD40 repeat-like	115	418	IPR036322	GO:0005515
	Sebi159g00047	422	Gene3D	-	102	202	IPR015943	GO:0005515
	Sebi159g00047	422	Gene3D	-	207	422	IPR015943	GO:0005515

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	SAP	Sebi159g00047		None	None	None

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Sebi159g00047	-		-	lja:Lj2g3v3337320.1	621.698