Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi159g00017 ATGCCGCAGGAGAGCTTATCAAACTCAATTTTCGCATCTCCTTGCAAGAGAGGGTTGAATTTGAAAGGTTCAGTCTTTAACAACAATGAGGCTTTGTACATTGTGACGGAAGAGAGCATCAACGATCATGAATTGGCTCAGAGGAAAGCAGAGGAAGCAGCTTCAAGGAGGAATCAAGCTGCAGAATGGCTTCGTCAAATGGACGATGTCGCATTTTCATCACTCTCCAAAGAACCTTCCGAAGAAGAATTCTCTCTTTCACTCCGCAATGGTCTCATTCTCTGCAACGTCCTCAACAAAGTCAATCCTGGTGCTGTCCTCAAGGTGGTGGAGAATCCCGTCCTTGCGGTTCAATCTGCAGAGGGAGCAGCACAGTCTGCGATTCAGTATTTCGAGAATATGAAAAATTTTCTGGATGCTGTTAGGGATATGAAGCTCTTGACGTTTGAAGCTTCGGATTTGGAAAAGGGGGGTTCATCAAATAAAGTTGTGGACTGCATTCTCTGTTTGAAGGGATATTATGAATGGAAGCTTTCAGGTGGAGTTGGGGTTTGGAGGTATGGAGGAACTGTGAGGATTACTTCCTTCCCTAAGGGGTCTCATTCCTCCATTGTGGGCAGTGATGAGTCCTTGGATGAGTCTGAGTCATCACAGTATGAACAGTTACTTGAATTTCTTCATCTATCTGGAGAGGTCTCAGTTGAAGAAACCAAAACTGCCAATGCTCTGGCTTTCCTGTTTGATCACTTAGGTCTCAAACTTCTCTTGGCTTATCTCAGAGAGGCTGATGGGGTTGAAGATCTGCCACTTAATGCAATGGTAATTGATACTTTACTCAGGAAGGTAGTCAGGGATTTTTCTGCATTGCTTGCTTCTCAAGGCACTCAGCTTGGACATTTCCTCAAGAAAATGTTGAAAGGAGATACTGGTTGCCTCTCTAAGAGAGAATTCATAGAAGCTATCACATTATATCTTAATCAAAGAAGTGGTTTGGCTTCAAATGATTTCTCTAAATTCTGCACTTGTGGTGGAAAAATTGATAGTACTCGGCATAATGTCAATTATTCTGCCAAGCACACTGAAATAATTGATGCTCAGCAGAAACAACTTGAGGGGATAAAGCACTTCTTTGAAGAGATAAAACTGGAGGTCAAGCAGATCCAATCTAAATGGGACCAAGAACTGAGCAGGCTTGAGAATCATATAAAGAGCCTTGAAGTGACCTCCTCCTCCTACCACAAAGTTTTAGAGGAGAACCGCGTTCTTTACAATCAAGTGCAAGACCTCAAAGGAGCCATTAGGGTCTACTGTAGAGTGAGACCCTTCTTACCAGGGCAATCAAATGGACAATCTTCTGTAGATTATATAGGAGAAAATGGAAACATAATGATTTTGAATCCCCTTAAGCAGGGAAAAGATGCTAGAAGGGTATTTTCATTCAATAAGGTGTTTGCAACAAGTACCACACAAGAACAAATATATGCTGATACTCAACCATTGGTCAGATCCGTTTTAGATGGCTATAATGTATGCATCTTTGCATATGGACAGACTGGCTCAGGAAAAACGTACACGATGAGTGGCCCTGATCTGGTGACTGAAGAGACATGGGGTGTAAACTATAGAGCTTTGCGTGACTTATTTCATATATCAAACGAAAGAGCAGATGCCATAAAATATGAAGTTGGCGTCCAGATGATTGAAATATATAATGAACAAAGGAACCGTGCTGTGGGTGCTACAGCTCTAAATGAGAGAAGCAGCCGTTCTCATAGTGTGTTGACAGTTCATGTCAGAGGGAGGGACTTAATTTCTAACTCCACTCTTAAGGGTTGTCTCCATCTTGTGGATTTGGCTGGAAGTGAGAGAGTGGACAAATCTGAGGCTGTTGGTGAGAGACTAAAGGAGGCCCAACATATTAATAAATCGCTTTCTGCACTTGGGGATGTTATCTCTGCTTTGGCACAGAAGAGTCCACATATTCCTTACAGAAATAGCAAACTTACACAAGTTTTACAAGATTCATTAGGTGGCCATGCAAAAACTTTGATGTTTGTTCATATAAATCCTGAACTCAACGCTCTTGGGGAGACAATTAGCACACTGAAGTTTGCTGAGAGGGTTGCATCCATTGAACTTGGGGCTGCTCAATCTAATAAAGAAACTGGTGAAATCAGAGAGCTAAAGGAAGAGATATCAAATATCAAATTGGCATTGGAGAGGAAGGAAACTGAACTGGAACAATGGAAATCTGGGAGTGCACGAAATGCCACAGAATCTCAGAAACCAAGAGCTTTGTCACCATTTCGTTTGCCCAAAAATGGTACCAGTGGCAGCATGAAACCTGAGAATTGTCAAAGATCCATGGATGATAGAAGCACTGAGGCTAAAAGTTGTTCTTCGGGTAAGCAGAAAAGGTCAAGATTTCCCTCAACATTTATGGACAAAGATTCCATGCCAAAAATGTCTCTTCTGGCTGAAGAAAGACCAGTGAGCTCAGGGAAGGGTAGAACTAGATCACCGTCACCACCGGTCAGGAGATCAATATCCACTGATAGAGGGTCTGTCATTAAAAGCAAGGTCAAAATTGACACAGCAGACAACCAACCAGTATTAAAGCATCCATTTCCAGCTAGAGTACCTGTAAATAAATCTCCTGTCACAATGTCAATGGTCCCTTCTACAGATAATAACTCAAGGGTGTATGTGCATCCACAGGAGCCAGTGAGGCAGGATAACGTTTCTGAAAGTCTCTTCAACCTCCAAAAGGTAAACTCCAGGAAAGTTCATCAAGAACATGAAGAGGAACAGTTCAAGCAAGCATCTGGTGTAGTAAGACAAGGGGGTATTCGGAAAAGCAAGGCTGACAATAAGGCCAAGGTCAAGCATCATCAGCAATTGCCCTTTAGGATTCGAAAGGCTGATCATATACCTACATCCATTCCTGACCTGGAAAATGCTGGTGAAATGACTGTGGAGGCACCTCGAAAGAGTGATTACTCTGAGCCAGAAAATGATCTTAGCTTTATAGAGTCTACAGTCAATGGTGTATTAAATCTTAAAAAGCTACGTCAGAATAACTCAAGGAATTCTCAGAACCTTGAATCAAGAGGAACAATGAAAGCAACCGAGCCTTTGTTGTCTAGCAAAGTTGAAAACAAACTTTTAAATTGTTCAGGTCGTAATCTTAAGGAAGGCACCAATACTTCCATGCATGAATTTAGAAGGAGCCGGTCTACACCACGTGGAAAGTTTTCTGTTTTATCTTGA 3270 0.4202 MPQESLSNSIFASPCKRGLNLKGSVFNNNEALYIVTEESINDHELAQRKAEEAASRRNQAAEWLRQMDDVAFSSLSKEPSEEEFSLSLRNGLILCNVLNKVNPGAVLKVVENPVLAVQSAEGAAQSAIQYFENMKNFLDAVRDMKLLTFEASDLEKGGSSNKVVDCILCLKGYYEWKLSGGVGVWRYGGTVRITSFPKGSHSSIVGSDESLDESESSQYEQLLEFLHLSGEVSVEETKTANALAFLFDHLGLKLLLAYLREADGVEDLPLNAMVIDTLLRKVVRDFSALLASQGTQLGHFLKKMLKGDTGCLSKREFIEAITLYLNQRSGLASNDFSKFCTCGGKIDSTRHNVNYSAKHTEIIDAQQKQLEGIKHFFEEIKLEVKQIQSKWDQELSRLENHIKSLEVTSSSYHKVLEENRVLYNQVQDLKGAIRVYCRVRPFLPGQSNGQSSVDYIGENGNIMILNPLKQGKDARRVFSFNKVFATSTTQEQIYADTQPLVRSVLDGYNVCIFAYGQTGSGKTYTMSGPDLVTEETWGVNYRALRDLFHISNERADAIKYEVGVQMIEIYNEQRNRAVGATALNERSSRSHSVLTVHVRGRDLISNSTLKGCLHLVDLAGSERVDKSEAVGERLKEAQHINKSLSALGDVISALAQKSPHIPYRNSKLTQVLQDSLGGHAKTLMFVHINPELNALGETISTLKFAERVASIELGAAQSNKETGEIRELKEEISNIKLALERKETELEQWKSGSARNATESQKPRALSPFRLPKNGTSGSMKPENCQRSMDDRSTEAKSCSSGKQKRSRFPSTFMDKDSMPKMSLLAEERPVSSGKGRTRSPSPPVRRSISTDRGSVIKSKVKIDTADNQPVLKHPFPARVPVNKSPVTMSMVPSTDNNSRVYVHPQEPVRQDNVSESLFNLQKVNSRKVHQEHEEEQFKQASGVVRQGGIRKSKADNKAKVKHHQQLPFRIRKADHIPTSIPDLENAGEMTVEAPRKSDYSEPENDLSFIESTVNGVLNLKKLRQNNSRNSQNLESRGTMKATEPLLSSKVENKLLNCSGRNLKEGTNTSMHEFRRSRSTPRGKFSVLS 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi159g00017 1089 SMART kinesin_4 430 719 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 Gene3D Kinesin motor domain 574 752 IPR036961 -
Sebi159g00017 1089 PANTHER KINESIN-LIKE PROTEIN KLP-3 61 573 IPR027640 GO:0003777|GO:0007018
Sebi159g00017 1089 ProSiteProfiles Kinesin motor domain profile. 432 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 1060 1089 - -
Sebi159g00017 1089 FunFam kinesin-like protein KIN-14F 46 175 - -
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 1025 1046 - -
Sebi159g00017 1089 ProSiteProfiles Calponin homology (CH) domain profile. 54 175 IPR001715 GO:0005515
Sebi159g00017 1089 PRINTS Kinesin heavy chain signature 507 528 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 PRINTS Kinesin heavy chain signature 661 682 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 PRINTS Kinesin heavy chain signature 581 598 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 PRINTS Kinesin heavy chain signature 612 630 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 Pfam Calponin homology (CH) domain 56 175 IPR001715 GO:0005515
Sebi159g00017 1089 Gene3D - 46 175 IPR036872 -
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 744 859 - -
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 951 965 - -
Sebi159g00017 1089 SMART ch_5 56 173 IPR001715 GO:0005515
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 1025 1043 - -
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 835 855 - -
Sebi159g00017 1089 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 433 748 IPR027417 -
Sebi159g00017 1089 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 374 587 - -
Sebi159g00017 1089 SUPERFAMILY Calponin-homology domain, CH-domain 50 195 IPR036872 -
Sebi159g00017 1089 Coils Coil 718 745 - -
Sebi159g00017 1089 Gene3D Kinesin motor domain 375 573 IPR036961 -
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 930 965 - -
Sebi159g00017 1089 Pfam Kinesin motor domain 573 711 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Sebi159g00017 1089 CDD CH_AtKIN14-like 56 171 - -
Sebi159g00017 1089 Coils Coil 388 408 - -
Sebi159g00017 1089 MobiDBLite consensus disorder prediction 785 802 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi159g00017 Sebi-Chr159 203353 211537 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi159g00017 368 711 Calmodulin-binding Proteins AT5G65930 37.374 7.82e-64 235
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi159g00017 K10406 - gmx:100811516 1727.61