Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi158g00028 ATGTTTGAAATAGAAGCATCTAACGTTACTAATACTCTCACTTTCTCTCTCTCTGAATCTTTTCCTTCATTTCTGATCGTTGCAGCAGTGCATTTTGCCGATTCTTCTTCCCGAAACTCTGTTCTCGGATCTGCAAATGCGAAGCGCTTCGATCTTCTCATAGCACTCCCTAATCCTTCGCATTCTCAAGCTCAGTTCGTCGAGTTGGAATTGGGGTATGCTTTTTTAGTTGTATTCCAACAAACTATGGACAGTGACCAGAAAATCCCCCCTCCATCGGATGGGCTTGTTGATGGTGTTCAGAAAATTAGAGCATTGCACGGGAGGACTACTGGCCCAACAAGGCGTTCTACGAAAGGGCAATGGACACCGGAGGAGGATGAGATCTTGCAGAATGCTGTTCAGCGTTTTAAAGGAAAAAATTGGAAAAAAATAGCGGAATGTTTCAAGGATAGAACTGATGTACAATGCCTACATAGGTGGCAGAAAGTCTTAAATCCTGAACTTGTCAAAGGTCCATGGTCTAAAGAGGAAGATGAAGTAATTATTGAATTGGTGAACAAATATGGGCCTAAAAAATGGTCAACTATTGCACAACATTTACCTGGACGAATTGGTAAGCAATGTCGAGAAAGGTGGCATAATCATCTTAATCCTGCCATAAACAAGGAAGCTTGGACACAGGAGGAGGAGTTGGCTCTAATACGTGCTCATCAGATTTATGGAAACAGATGGGCAGAATTAACAAAGTTTTTGCCTGGAAGGACAGATAATGCTATTAAAAACCACTGGAACAGTTCTGTCAAAAAGAAATTGGATTCTTACTTGGCATCAGGGTTGCTTACTCAGTTCCAATCTGTACCTCATGATGGAAATCCAAGTCAATCGATGGTTATAACATCTTCAAGGTTGCAATGTAGTGGAGATGAAAATGGTCCTAAGGGTTCTGAAGGAGAGGAAGTTTCACAGTGTAACCAAGAGTCTGCTAGCGCTCTTCATTTTCCATCCGCCAGAGAGATGAGCAATGTTGACTTACAAACTCGAGAGGAATCTAGGCCAAATGAAGAATGTAATATTGGAAAGGATCATAGTCCAAGTCAAGCATCTTGTTCAGAGCCATATTACGTATCAATTGATGATGTTACTATATGCATCCCTGAAATTGCTCACCGAGAGGCATGCTCTTCTGAATTCATTGAGCAGCAATACTCACATGAGCCTGGAAATCCTATAAATGGGGATTATCAGTTCAATTTACATTCTTTACCCAATGTTTCATCAATGAACTTGGGCCAGGAATCCTTGCAGTTGCAAAGAGATTGTACAGCTCCTGGTGAAATCCCTGACATGGTAAATGCTCCATATCAGAAGTCAGTGGGATTAGGTGTTTCAACATCCATGGGACCTACATCTATGGATTCTGTTAAACCACAGCACATTTTGATATCTGATGATGAATGTTGCCGAGTCATATTTTCAGAGCCAATGAATGATGGATGCTTTTCCCGTGGAGATTACAATAAAGGTGTGGATATGGTTGAATTTTCTGGATGCCCTTCATTTCTTTGCCAATCATGTCAAAGTCAGATATCTGAAACTAGTGGAACTTCAACTCCACGGCTAACATGTCCTCAGTGCTCTAATAATTTTAAAGGAATGTCTTCCTCCCAATCTGTCCCTCCAGTACTTTCTGTTAGTGACAGTAGACTGGGGCCTGAGGATCAGCAATTTGTTTCAAGAGCACCTGATAACATGACTTATGCCAATAACATATCCAGTTCTCCTTGTATTGATCGTATACAGAGTGCAGTAATGCAAGAGCCATCAGATATTCTGAAGGATACTTCAAAATTGGTCCCTTTAAATAGTTCTGGCTGTGGATCAGATGCTAAGCAAACTTGTTATCCAACAGATGAAAAGTCAAACGTGCACACAGAAAAGGACAACACAGGAGCTCTATGTTATGAACCTCCCCGTTTTCCAAGCTTGGACATTCCTTTCTTCAGCTGTGATCTTGTACAATCTGGGGGTGATATGCAGCAAGAATTTAGTCCCCTGGGTATCCGCCAGTTTATGATGTCTTCTATGAACTGTCTAACTCCTTTGAGGTTGTGGGACTCGCCCTCTCGTGATGATAGTCCAGAAGCATTGTTGAAAAGTGCAGCTAAAACCTTTACGGGTACACCATCCATATTAAAGAAACGACATAGGGATTTGTTATCACCACTCTCAGATAAAAGAATGGATAAGAAACTTGAGACTGACAGGACATCCACCTTGACCAAAACTTTTCCCAGTTTGGACGTCATGTTTGATGACAATGAGAAAGCAGATATGCTTTCTACATCTTCATTGCAAAAACGGGATTCTGGGGCTTCTGTTTACAATGATGATAAAGAAAATTGTGGAAAAACTTTGAAAGAGAAACAAGTAAAGGAGACAACTAAGTCTGCAATTTTGGAAGGAAAGAGCTCTACAAGAGATGCCGGAGACAGTAATTCTCAGGATAAGGTTAAGCAGCAACCACTTGATGTTGTTTCCAAGATGAAGATTGATGCTGATGCTGCTGAGATTGTGCAACAACCTTCTGGAGTTTTGGTTGAACATGATATGAATGACCTGTCACTGTATTCTCCTGATCAAGTTGGTTTTAAAATGGACAGAGTTCTGGCTTCAAGTACTGGAACTCCCAAAAGCTTGATCAACAGGAGCTTGGAAACAGCTCCAAACCAGAGCATCCCTTTGAAACCATCTTCTGAAAATTCATGCTCAAGAGTTAACCATCCTTGTGTTCGTGCAAAGGAGCATGAAAATCTTTCAATTGCTGTTCCTTGTGTAAAAGCGCCAGGGGAGAATTCAGGGGATCAAACCAGAAACGATGGTGGTTTTGAAACATGTAGCATATTTGGCGGAACACCTTTTAGGAAAAGCATTGAATCACCTTCTGCATGGAAATCTCCTTGGTTCATCAATGCTTTTCTGTCTAGCCCCAGATTTGATACTGAAATTACAATTGAGGATTTTGGGTATTTCATGAGCCCAGGTGATAGAAGCTATGATGCAATCGGGTTGTTAAAACAGATCAGTGAACAAAATGCTGCCACATATGCTAATGCCCAGGAGATTTTGGGAAATGAAACTCCAAAAGCATTACCAGAAGATGCATCTGGAAATGCGAATAGGGACCAGGAAAATAATGATCCTCTCAATCGGCCAGGGAATCGTTCTCAGTTGGCTTCAAATGCTTTGGTGGAGCGACGTGTACTTGACTTTAGTGAATGTGGCACACCAGACAAGGGTGATAGCAGCAAGTCCTCAGCTATGAGCTTCTCAAGCCCTTCTTCGTATTTGTTAAAGGGTTGTAGATAA 3369 0.4141 MFEIEASNVTNTLTFSLSESFPSFLIVAAVHFADSSSRNSVLGSANAKRFDLLIALPNPSHSQAQFVELELGYAFLVVFQQTMDSDQKIPPPSDGLVDGVQKIRALHGRTTGPTRRSTKGQWTPEEDEILQNAVQRFKGKNWKKIAECFKDRTDVQCLHRWQKVLNPELVKGPWSKEEDEVIIELVNKYGPKKWSTIAQHLPGRIGKQCRERWHNHLNPAINKEAWTQEEELALIRAHQIYGNRWAELTKFLPGRTDNAIKNHWNSSVKKKLDSYLASGLLTQFQSVPHDGNPSQSMVITSSRLQCSGDENGPKGSEGEEVSQCNQESASALHFPSAREMSNVDLQTREESRPNEECNIGKDHSPSQASCSEPYYVSIDDVTICIPEIAHREACSSEFIEQQYSHEPGNPINGDYQFNLHSLPNVSSMNLGQESLQLQRDCTAPGEIPDMVNAPYQKSVGLGVSTSMGPTSMDSVKPQHILISDDECCRVIFSEPMNDGCFSRGDYNKGVDMVEFSGCPSFLCQSCQSQISETSGTSTPRLTCPQCSNNFKGMSSSQSVPPVLSVSDSRLGPEDQQFVSRAPDNMTYANNISSSPCIDRIQSAVMQEPSDILKDTSKLVPLNSSGCGSDAKQTCYPTDEKSNVHTEKDNTGALCYEPPRFPSLDIPFFSCDLVQSGGDMQQEFSPLGIRQFMMSSMNCLTPLRLWDSPSRDDSPEALLKSAAKTFTGTPSILKKRHRDLLSPLSDKRMDKKLETDRTSTLTKTFPSLDVMFDDNEKADMLSTSSLQKRDSGASVYNDDKENCGKTLKEKQVKETTKSAILEGKSSTRDAGDSNSQDKVKQQPLDVVSKMKIDADAAEIVQQPSGVLVEHDMNDLSLYSPDQVGFKMDRVLASSTGTPKSLINRSLETAPNQSIPLKPSSENSCSRVNHPCVRAKEHENLSIAVPCVKAPGENSGDQTRNDGGFETCSIFGGTPFRKSIESPSAWKSPWFINAFLSSPRFDTEITIEDFGYFMSPGDRSYDAIGLLKQISEQNAATYANAQEILGNETPKALPEDASGNANRDQENNDPLNRPGNRSQLASNALVERRVLDFSECGTPDKGDSSKSSAMSFSSPSSYLLKGCR 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi158g00028 1122 SUPERFAMILY Homeodomain-like 168 264 IPR009057 -
Sebi158g00028 1122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 114 165 IPR017930 -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 1058 1076 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 343 359 - -
Sebi158g00028 1122 ProSiteProfiles Myb-like domain profile. 166 217 IPR001005 -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 1098 1116 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 1048 1076 - -
Sebi158g00028 1122 ProSiteProfiles Myb-like domain profile. 218 268 IPR001005 -
Sebi158g00028 1122 SUPERFAMILY Homeodomain-like 120 175 IPR009057 -
Sebi158g00028 1122 ProSiteProfiles Myb-like domain profile. 114 165 IPR001005 -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 318 332 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 817 841 - -
Sebi158g00028 1122 SMART sant 170 219 IPR001005 -
Sebi158g00028 1122 SMART sant 222 270 IPR001005 -
Sebi158g00028 1122 SMART sant 118 167 IPR001005 -
Sebi158g00028 1122 CDD SANT 225 265 IPR001005 -
Sebi158g00028 1122 CDD SANT 122 165 IPR001005 -
Sebi158g00028 1122 FunFam Transcriptional activator Myb isoform A 171 223 - -
Sebi158g00028 1122 Gene3D - 224 283 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 305 369 - -
Sebi158g00028 1122 FunFam Transcription factor MYB3R-2 224 286 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 1093 1122 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 781 841 - -
Sebi158g00028 1122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 222 272 IPR017930 -
Sebi158g00028 1122 Gene3D - 171 222 - -
Sebi158g00028 1122 MobiDBLite consensus disorder prediction 792 816 - -
Sebi158g00028 1122 CDD SANT 173 217 IPR001005 -
Sebi158g00028 1122 Pfam Myb-like DNA-binding domain 171 217 IPR001005 -
Sebi158g00028 1122 Pfam Myb-like DNA-binding domain 223 265 IPR001005 -
Sebi158g00028 1122 Pfam Myb-like DNA-binding domain 119 165 IPR001005 -
Sebi158g00028 1122 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 166 221 IPR017930 -
Sebi158g00028 1122 Gene3D - 118 170 - -
Sebi158g00028 1122 FunFam Transcriptional activator Myb isoform A 118 170 - -
Sebi158g00028 1122 PANTHER MYB PROTEIN-RELATED 119 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi158g00028 Sebi-Chr158 930297 953869 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi158g00028 103 1122 MYB Transcription Factor Family AT4G32730 44.759 0.0 724
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi158g00028 Myb_DNA-binding 9.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi158g00028 - K09420 aprc:113848458 1595.48