Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi157g00060 ATGTCCCACCAAGGTTACAAAACCATAGACCAAAGAAGGGTCATGAAGACCAGTGGAGGAGGAGAGATAGTTGAAGTAGATGGAGGGCACATTATTCGACCAATAGGTCGAAAAGATCGCCATAGCAAGGTTTACACTTCAAAAGGTCCTCGTGATCGCAGGGTAAGACTCTCAGCTCACACAGCTATTGAGTTCTATGATGTTCAAGATCGTCTTGGCTATGATCGACCCAGCAAAGCTGTGGATTGGCTCATCAAGAAAGCAAAACCTTCCATTGACCAGCTTGCTGAGCTTCCACCATGGAATCTATCTGCTACAACTCAAATCCCTGAAGAATCAGAAGAATATCAGCAGAATAATGCTGCTGGAGGCTTAACTGGTAATGGCATGCTCATTGGAGAACCATCACAATCTTCAGCAGCTGATTACAATTTTCAGCTCCAAATGCAATTAGGTGATAATAGCAACCAGCAGCAGCAGGGTAATGCCTTTGTTTCACCACATGTTGATCCAACTGACCCTCCTATTGCTTTCTTTCCCACAAACTCTGCTACTTCTTCCTCCATCAATTTTCATACCTGCCCACCTGATATCATCCCCAGACCAGACATTTCCACTGAAAATCTTGGCCTTTCTCTTCACTTGTTCCAAGATCACCCTGGTTTTATTCCTTGGCAATCACACCAACAAGGTGAAACTGAAAACCATGCAGTACCTTCAAATGAACAACAAACCCTTTTTGCTGGCTTAACCCCTGTTGGGTTTGAGAATAATTATCAGAGAATGGTGACTTGGAACAATGAAACAACCACTGATCATGTCAACAAAGTGGGGTTCATGGTAAACCCACCGCCATATCTTGGTTCAGGTTCTTCAGAGTATTCTCCAAGTGGGACCCTTCAGTCCAGTTTTTCACCTTCGTTTCGGTCTTGGGGTGACTTTCCAATGGCTTCCTCAGAGCTTCACAGGTCTCAACCAGTTCACCAAGCTATCTTTGGTAGTAGGTTTCTGTCTCAGGGGTTTGTTGGGTTTGACATTCCAGAAAGAATTCAAGCTGAGGAGCAGAGAGAGAAGAACCATGGAGTTGCTTCCAACAGACCATCTTCTTATTCTCCTACACACAATTGA 1128 0.4433 MSHQGYKTIDQRRVMKTSGGGEIVEVDGGHIIRPIGRKDRHSKVYTSKGPRDRRVRLSAHTAIEFYDVQDRLGYDRPSKAVDWLIKKAKPSIDQLAELPPWNLSATTQIPEESEEYQQNNAAGGLTGNGMLIGEPSQSSAADYNFQLQMQLGDNSNQQQQGNAFVSPHVDPTDPPIAFFPTNSATSSSINFHTCPPDIIPRPDISTENLGLSLHLFQDHPGFIPWQSHQQGETENHAVPSNEQQTLFAGLTPVGFENNYQRMVTWNNETTTDHVNKVGFMVNPPPYLGSGSSEYSPSGTLQSSFSPSFRSWGDFPMASSELHRSQPVHQAIFGSRFLSQGFVGFDIPERIQAEEQREKNHGVASNRPSSYSPTHN 375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi157g00060 375 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 33 306 IPR005333 GO:0003700
Sebi157g00060 375 MobiDBLite consensus disorder prediction 354 375 - -
Sebi157g00060 375 ProSiteProfiles TCP domain profile. 37 95 IPR017887 -
Sebi157g00060 375 Pfam TCP family transcription factor 37 137 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi157g00060 Sebi-Chr157 1161427 1162554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi157g00060 19 371 TCP Transcription Factor Family AT3G15030 38.945 3.27e-61 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Sebi157g00060 TCP 3.8e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi157g00060 - - gmx:100814907 369.392