Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi157g00050 ATGCCAGAAGAACAGTCAATTATAGGAAAAAGGCAGATATATTATGATAAACGCAGTGGCGAGACATTAATATGCAGTGACAATGATGAGGAACCAACAAAAGATGACAAAGTTAAACATGATTTTTCCAGGGGTGAAGATCGCATTTTGTGGATGGAATTTGAGGAACATGGGTTCACTGAGGAAGTGTTGAATATTGTTTCAAAGTTTGTCAATGGTACCGTTTCAGAAATTCAAAGTGAAAAGCAGAAAGTATGGTCTGAACCTGAAGGTGACAGGAAACCGTGCAATAATCATTGTTATTTTCAGTCACCTGATTCAATGGAAGTGCAAGTCGATGAGAAGTGCTTCTCAAATTGGAAACCTCTGGAAAAAGATTTATATTTGAAGGGTGTAGAAATATTTGGGAGAAACAGTTGCCTTATAGCACGAAACTTACTTTCTGGCTTGAAGACTTGCATGGAAGTAGCTAGCTACATGTATGCTGCAGAAATATCAATGCCTAACAAATCCATACTAAGTTCAACCGTGGAAAAAAATGGAAAAGTTGATGCAGAGAGCACAGACCGAGAGATGGAATCAGGGTCACGAATGCTACAGAAAAAGCGCAAAACTAGGAAGTTGAAATTTTCTTTCAAGTCTTCTCGCCTCTCATATGGAAAAGAAATACTGCTAGAAAAAGTAAAACTTACAAGCAGTATACACCTTGTGGATGTCAGGGAATGTGTGGAAAGCAATGTTCTTGTCTTCAAAATGGATCCTGCTGTGAAAAATATTGTGGATGTTCAAAGCTATGTGGAAATCGGTTCAGAGGATGTTATTGTGCTAAGAGTCAATGCAAAAGTCGACAATGTCCATGCTTTGCAGCAAACCGAGAATGTGACCCAGATGTCTGTCGAAATTGTTGGTTGTGGCGGTGGTTCATTAGGAGAGCCACCTCGACGTGGAGATGGTCAATGTGAAAATATGAGGATTCTTTTAAGGCAAAAGCAGAGAGTTAGCAAGTGTTTGTTTAATGGTATTGGTAAGTATGTCATTGATGCTTATCGCAAAGGAAACAAGTTGAAATTTGCTAACCACTCAAAAAAACCCAACTGTTATGCAAAGATTATGCTTGTTGGTGGGGATCATCGAGTAGGCATATTTGCCAAGAAACGCATTGAAGCTGGTGAGGAGATTTTCTACGATTATTGCTATAGGCCAGAGCAAGCACCAACGTGGTTTTAA 1227 0.3928 MPEEQSIIGKRQIYYDKRSGETLICSDNDEEPTKDDKVKHDFSRGEDRILWMEFEEHGFTEEVLNIVSKFVNGTVSEIQSEKQKVWSEPEGDRKPCNNHCYFQSPDSMEVQVDEKCFSNWKPLEKDLYLKGVEIFGRNSCLIARNLLSGLKTCMEVASYMYAAEISMPNKSILSSTVEKNGKVDAESTDREMESGSRMLQKKRKTRKLKFSFKSSRLSYGKEILLEKVKLTSSIHLVDVRECVESNVLVFKMDPAVKNIVDVQSYVEIGSEDVIVLRVNAKVDNVHALQQTENVTQMSVEIVGCGGGSLGEPPRRGDGQCENMRILLRQKQRVSKCLFNGIGKYVIDAYRKGNKLKFANHSKKPNCYAKIMLVGGDHRVGIFAKKRIEAGEEIFYDYCYRPEQAPTWF 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi157g00050 408 ProSiteProfiles SET domain profile. 292 398 IPR001214 GO:0005515
Sebi157g00050 408 Pfam SET domain 267 397 IPR001214 GO:0005515
Sebi157g00050 408 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE E(Z) 115 215 IPR045318 GO:0006338|GO:0042054
Sebi157g00050 408 Gene3D SET domain 314 406 IPR046341 -
Sebi157g00050 408 SUPERFAMILY SET domain 337 400 IPR046341 -
Sebi157g00050 408 SMART set_7 271 404 IPR001214 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi157g00050 Sebi-Chr157 946142 949804 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Sebi157g00050 SET 6.2e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi157g00050 - K11430 csin:114315404 238.039