Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi157g00033 ATGTGTCCACAAGCGAGGAGGGTTGATTTCAGCGTGGGTGACAAAGTGGAGGTGTCTATCGACGAAGAAGGGTTTTGGGGTTCTTACTATGAAGGCACTATTGTGTCCCCACTTGATGAGAATGGACGCTACATGGTGCGCTACAAGAACCTTCTCGAAGATGACAGGTCTAAGCCTCTCACAGAGCCTATTCTACCCAAAGATCTTCGACCCAAGCCACCTCGTGTTCGCGTTGGGGAGTACAAGGTGTATTCCTATGTCAATGCTTTTGCTAACGATGGTTGGTGGTTTGGTAGGATCACTAGGCAAAAGAGCGAATCTCACTACTATGTCTACTTCAAAACCACAAATGAAGAGATTCCCTACCATATCTCTCGTATCAGGGTTCACCAAGAGTGGGCTAATGGGGACTGGATTGCGTTCTAA 426 0.4742 MCPQARRVDFSVGDKVEVSIDEEGFWGSYYEGTIVSPLDENGRYMVRYKNLLEDDRSKPLTEPILPKDLRPKPPRVRVGEYKVYSYVNAFANDGWWFGRITRQKSESHYYVYFKTTNEEIPYHISRIRVHQEWANGDWIAF 141
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi157g00033 141 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 139 - -
Sebi157g00033 141 SMART agenet_At_2 8 77 IPR014002 -
Sebi157g00033 141 SMART agenet_At_2 79 135 IPR014002 -
Sebi157g00033 141 Gene3D - 4 59 - -
Sebi157g00033 141 Pfam Agenet domain 13 74 IPR008395 -
Sebi157g00033 141 CDD Tudor_Agenet_AtDUF_rpt1_3 10 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi157g00033 Sebi-Chr157 702517 702942 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi157g00033 22 133 PHD Transcription Factor Family AT5G58610 29.851 6.26e-11 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi157g00033 - - gmx:121175082 179.104