Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi157g00030 ATGTGTCCACCAGCAAGGAGGGTCGATTTCAGTGTGGGTGACAAAGTGGAGGTGTCTATCAATGAAGAAGGGTTTTGGGGTTCTTACTATGAAGGTACTATTGTGTCCCCACTTGATGAGAATGGATGCTACATGGTGCGGTACAAGAACCTTCTCGAAGATGACAGATCTAAGCCTCTCACAGAGCCTATTCTACCCAAATATCTTCGACCCAAGCCACCTCATGTTCGTGTTGAGGAGTACAAGGTGTATTCCTACGTCAATGCTTTTGCTAACGATGGTTGGTGGTTTGGTAGGATCACTAGGCAAAAGAGTGAATCTCACTACTATGTCTACTTCAAAATCACAAATGAAGAGATTCCCTACCATATCTCTCGTATCAGGGTTCACCAAGAGTGGGGCTAA 405 0.4494 MCPPARRVDFSVGDKVEVSINEEGFWGSYYEGTIVSPLDENGCYMVRYKNLLEDDRSKPLTEPILPKYLRPKPPHVRVEEYKVYSYVNAFANDGWWFGRITRQKSESHYYVYFKITNEEIPYHISRIRVHQEWG 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi157g00030 134 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 9 133 - -
Sebi157g00030 134 SMART agenet_At_2 79 134 IPR014002 -
Sebi157g00030 134 SMART agenet_At_2 8 77 IPR014002 -
Sebi157g00030 134 Pfam Agenet domain 13 74 IPR008395 -
Sebi157g00030 134 CDD Tudor_Agenet_AtDUF_rpt1_3 10 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi157g00030 Sebi-Chr157 685133 685537 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi157g00030 22 133 PHD Transcription Factor Family AT5G58610 28.358 2.56e-08 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi157g00030 - - gmx:121175082 169.859