Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi157g00019 ATGGCATTCGCTCCCACTGGCGTCAGATTCGTTGTGCCGTTCGTTCAAGAAGATACCGCTTGCCTCCTCAATGGTGCTTCTGTCCTTGACGCCAAGCATCCCAAGCTCGATGAAAGAGTGGAACTGCTCGCCAATCTCATTATTGAGAATGTGGTGAACGTGGTTGAAACAAGTCAGCTCCGCAGTCGAATCGCAGGGATTCAGAAGATGTGCAATGACGAAGATTCAAACTCTTCAGATGGAAATGCTTCCTCCCCTCTTCCTTCTGTTCTCGAAACTCCTTTCAAGATTGTTGACGCTTCCCAAAGCCCCGCTGCTGGAAAGCCTGATGAGATCGCGAAGCTATTTCCAAACATGTTCGGGCAACCATCGGTGATGTTGGTACCGAGTGATTCGAACATTGTGCAGGCGAATCAAGAATTGAAGACTGGTGTGGCTGCTGGGATTGCTTTACAGGTTTACAGGTTTGCTCCAAGAAGGTCTGTGGAGAGTGCGTTCAAGGTGTTTGAAACTATGCCAGAGAGAAACTTGGTTTCCACACTTTCTTCCAAACTCTCTCTACCGGAAACGCTAACGGCAGAAAAGACGGAGCCATTGCTGGCGGCGGCTGCTTTACAGTCTGGTCCTGATGAGCGGAGTATTCCTGGAAATACCTTAGTTGTTGATGTTGACATGCCTTTTAGTGGCCTGACAACATTTGGAGGTTCATTTTTGTCAAAGTTCCAATGTTCTCAAATGCCGCATCCACTGCTAGATGAGGTAACATTTGTGGACACTCCTGGTGTCCTGTCTGGTGAGAAACAAAGGACTCAACGAAGCTATGATTTCACTGGTGTTGTATCTTGGTTTGCTGCCAAATGTGATCTTATTCTTATGCTATTTGATCCGCATAAACTTGACATCAGTGATGAGTTTAAACATGAGAATACTGGACAAATTAAGATTGGAGATCTTGGATTGGCAATTGTCATACAGCAGCCTACTGCCCGTAGTGTTATAGGTACACCAAAATTCATGGCCCTTGAGCTTTATGAGGAAGAATACAACAAACTTGTTGACATATATTCCTTTGGCATGTGCATCTTGGAAATGATCATTAAGTTTCAGGATGGAGACCTTGTTGTTTTCTCTGAAGTCCCTTTGTATCGTGGCTGGATAGTTGATTCTCAAGATTATGTGCAGGAATTGTTTGCTAAAATGTCTCAAAGGGATGTTTTAAACAAGACTGTAGATTACTTTGGATAG 1245 0.445 MAFAPTGVRFVVPFVQEDTACLLNGASVLDAKHPKLDERVELLANLIIENVVNVVETSQLRSRIAGIQKMCNDEDSNSSDGNASSPLPSVLETPFKIVDASQSPAAGKPDEIAKLFPNMFGQPSVMLVPSDSNIVQANQELKTGVAAGIALQVYRFAPRRSVESAFKVFETMPERNLVSTLSSKLSLPETLTAEKTEPLLAAAALQSGPDERSIPGNTLVVDVDMPFSGLTTFGGSFLSKFQCSQMPHPLLDEVTFVDTPGVLSGEKQRTQRSYDFTGVVSWFAAKCDLILMLFDPHKLDISDEFKHENTGQIKIGDLGLAIVIQQPTARSVIGTPKFMALELYEEEYNKLVDIYSFGMCILEMIIKFQDGDLVVFSEVPLYRGWIVDSQDYVQELFAKMSQRDVLNKTVDYFG 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi157g00019 414 SUPERFAMILY Protein kinase-like (PK-like) 307 367 IPR011009 -
Sebi157g00019 414 ProSiteProfiles Protein kinase domain profile. 139 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi157g00019 414 Gene3D Transferase(Phosphotransferase) domain 1 310 407 - -
Sebi157g00019 414 Pfam Protein kinase domain 309 367 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi157g00019 414 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 305 366 - -
Sebi157g00019 414 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 203 304 IPR027417 -
Sebi157g00019 414 Gene3D - 191 309 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi157g00019 Sebi-Chr157 394459 396841 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi157g00019 205 306 EF-hand Containing Proteins AT3G20290 84.314 3.86e-57 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Sebi157g00019 Pkinase 3.9e-09 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi157g00019 K12483 - gmx:100786047 204.142