Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi157g00016 ATGGAGGAGATGCGAGAAGATGCAGGACCGGCAGAGCAAAGGCCATCCAATGTGTCATGGTGGCCTTCAGATTTCGTTGAAAAATTTGGATCTGTTTCTTTGGGCTCTCAAGATGAGACCTTAAATAATAAAGAATCACCTAGACACACTAACCAAGATTTTATGTCACCTCAGAGAGCATCACAAATTCTCTGGTGCACTGGAATGCTTTCAGAACCAATACCGAATGGTTTTTATTCAGTTGTTCCGGAGAAAAGGCTCAGGAAGCTTTTCGATAGTATTCCCACTTTGGACGAGCTTCATGCTTTGGGTGGAGAAGGTTTTAGGGCTGATATAATTGTTGTGGATGCAGAGAAAGATAGAAAGTTATCTATGTTGAAGCAATTAATTGTGGCATTGGTTAAAGGATTGAACTCAAATCCAGCTGCGATGATTAAGAAGATAGCTGGATTGGTTTCTGATTTTTATAAGCGGCCAAATGTAGAAAGTCCAGCAAAAGCTGTACTTGAGGAATCCTCCCACATGTTTGAGAATCGTGGTGTCCAGATGCTGGGGCAAATAAAGCATGGTTCATGTCGTCCTCGAGCTATCTTATTTAAAGTATTGGCAGATACTGTAGGTCTTGAAAGTAGGCTTATGATGGGTTTTCCAAATGATGGGGCTGCTGAGTGTGTAGACTCATACAAGCATATGTCTGTGATAGTTGTGTTAAATTCTGTGGAATTGCTGGTTGATCTTATGCGTTTTCCTGGCCAACTGTTACCACGATCAATCAAATCAATTCTTATGACACACATTTCTGCAGCTGGAGAGAGTGATTCGGCAGAAAATGATTCTTGTGATTCACCATTAGAGCCAAACAGTCCTTTATATGGGGTTTCAGAGAGTGAACCCAACATTGCAACTGCATTTGGTCGGCGTAGTCGGAGAAAGGTCATTGCTGAACAGAGGACTGCTAGTTCAAGTCCAGAACATCCATCATTTCGAGCACGTGGACGGTCCAAACTTAGTGGTGACAGGACTGCATTTAGAGATTTTGCTGATGACCAGGCTACATCAAGATCCAGCTATAAGTCAGATGGTGCATCATCATCAGAAGCTCGTAGGCTACGAAGAAGAAGCATCAGCATTACACCAGAGATTGGTGATGATATCGCTAGGGCTGTACGGGCAATGAATGAAAAGCTAAAGCAAAATCGTCTTCTGAGAGAACAAGGGGATGATAGTTCATTGCCCCATTCTCCAAATGATACAACTAGCAGTGCAGATCTTCAAAAAAATGTGTCAAATTTCCATCTTGATGGTCATCATGAAAGGTCCCCCTTATATTCATTTCACCGAGACAATGTAACTTCTCAGAAGGCAATGTCATTACCCTCTTCACCGCACGATTATAGAGGACAAGCTTCTGAAAGAAGCGACCCATCAGGATATACAGCGAATGAACTGGAGTCGACTTGGAATAAAGTCCTTGAATCACCAATGTTCAATAATAAACCTCTGTTACCATATGATGAGTGGAATATTGACTTCTCAGAATTGACAGTTGGAACTCGCGTTGGGATCGGGTTCTTTGGAGAAGTTTTTCGTGGCATATGGAATGGCACAGATGTTGCAATCAAGGTCTTCTTAGAGCAAGATTTAACTGCTGAAAATATGGAAGATTTCTGCAATGAGATATCCATTCTCAGCCGACTTCGACATCCTAATGTTATATTATTTCTCGGTGCATGCACCAAGCCTCCTCGCTTGTCAATGGTAACTGAATATATGGAAATGGGATCTTTGTTTTACTTGATTCATGTGAGCGGTCAAAAGAAGAAGCTTAGCTGGCGAAGAAGACTAAGGATGTTGCGTGACGTGTGCAGGGGCTTGATGCATGTACATCGTATGAAGATTATTCACCGTGATGTGAAAAGTGCGAATTGTCTTGTGGATAAGCACTGGACAGTGAAAATCTGTGATTTTGGACTTTCGAGAATAGTAACAGATACTCCCATGAGAGATTCTTCATCAGCTGGAACCCCAGAATGGATGGCTCCTGAACTGATTCGAAACGAGCCATTCTCTGAAAAATGTGATATCTTTAGCCTGGGGGTGATAATGTGGGAGCTCTGCACCTTGAGTAGGCCATGGGAAGGGGTACCGCCAGAGAGGAGTGCTGGGCAGAACCGCATGAGAGGCCATCTTGTGAGGAGATCCTCTCTCGCTTGGTGGACATAG 2223 0.4305 MEEMREDAGPAEQRPSNVSWWPSDFVEKFGSVSLGSQDETLNNKESPRHTNQDFMSPQRASQILWCTGMLSEPIPNGFYSVVPEKRLRKLFDSIPTLDELHALGGEGFRADIIVVDAEKDRKLSMLKQLIVALVKGLNSNPAAMIKKIAGLVSDFYKRPNVESPAKAVLEESSHMFENRGVQMLGQIKHGSCRPRAILFKVLADTVGLESRLMMGFPNDGAAECVDSYKHMSVIVVLNSVELLVDLMRFPGQLLPRSIKSILMTHISAAGESDSAENDSCDSPLEPNSPLYGVSESEPNIATAFGRRSRRKVIAEQRTASSSPEHPSFRARGRSKLSGDRTAFRDFADDQATSRSSYKSDGASSSEARRLRRRSISITPEIGDDIARAVRAMNEKLKQNRLLREQGDDSSLPHSPNDTTSSADLQKNVSNFHLDGHHERSPLYSFHRDNVTSQKAMSLPSSPHDYRGQASERSDPSGYTANELESTWNKVLESPMFNNKPLLPYDEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTAENMEDFCNEISILSRLRHPNVILFLGACTKPPRLSMVTEYMEMGSLFYLIHVSGQKKKLSWRRRLRMLRDVCRGLMHVHRMKIIHRDVKSANCLVDKHWTVKICDFGLSRIVTDTPMRDSSSAGTPEWMAPELIRNEPFSEKCDIFSLGVIMWELCTLSRPWEGVPPERSAGQNRMRGHLVRRSSLAWWT 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi157g00016 740 MobiDBLite consensus disorder prediction 272 297 - -
Sebi157g00016 740 SMART serkin_6 514 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi157g00016 740 MobiDBLite consensus disorder prediction 328 347 - -
Sebi157g00016 740 FunFam Serine/threonine-protein kinase isoform 1 504 592 - -
Sebi157g00016 740 MobiDBLite consensus disorder prediction 453 479 - -
Sebi157g00016 740 MobiDBLite consensus disorder prediction 403 423 - -
Sebi157g00016 740 ProSiteProfiles Protein kinase domain profile. 514 740 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi157g00016 740 SUPERFAMILY Protein kinase-like (PK-like) 488 718 IPR011009 -
Sebi157g00016 740 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 311 723 - -
Sebi157g00016 740 CDD STKc_MAP3K-like 520 728 - -
Sebi157g00016 740 Gene3D Phosphorylase Kinase; domain 1 507 591 - -
Sebi157g00016 740 ProSitePatterns Protein kinases ATP-binding region signature. 520 541 IPR017441 GO:0005524
Sebi157g00016 740 MobiDBLite consensus disorder prediction 409 423 - -
Sebi157g00016 740 Pfam Ethylene-responsive protein kinase Le-CTR1 58 253 - -
Sebi157g00016 740 MobiDBLite consensus disorder prediction 33 54 - -
Sebi157g00016 740 Gene3D Transferase(Phosphotransferase) domain 1 592 736 - -
Sebi157g00016 740 ProSitePatterns Serine/Threonine protein kinases active-site signature. 633 645 IPR008271 GO:0004672|GO:0006468
Sebi157g00016 740 MobiDBLite consensus disorder prediction 314 371 - -
Sebi157g00016 740 Coils Coil 385 405 - -
Sebi157g00016 740 MobiDBLite consensus disorder prediction 348 363 - -
Sebi157g00016 740 Pfam Protein tyrosine and serine/threonine kinase 515 720 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi157g00016 Sebi-Chr157 321367 334437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi157g00016 1 719 MAP Kinase Kinase Kinase AT3G58640 68.140 0.0 1059
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Sebi157g00016 PK_Tyr_Ser-Thr 2.4e-54 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi157g00016 - - gmx:100807193 1293.1