Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00098 ATGGTTCTGATTATTCATCATCATGTACTGAAGTTGATATCAATACTAATTACTCTCTGCACTTTATCAGATTGCTATGATCCGTTGGATCCCAATGGGAACATTTCGGTAACCTTTGACATTTACCAAAGTACAGATAATGGATATCTGGCAAGGGTGACTGTTCAAAACAATTATCTATATCGGCATGTAGATAAACCTGGTTGGAAACTAGGATGGACATGGGCTAACAATGAAGTGATATGGTCAATGAATGGTGCCTTTGCAACTGATAGAGGGAATTGCTTAGGTTATAGCGGTTCTCAGATACCACATTCCTGCAAGAAAGATCCTACCATAGTTGATCTCACTCCACAAGTCTCACAAAATAGGTCAGAGAATTGTTGTCGTGGTGGTCTCCTCTCTGCCTGGGCTATAGATCCTTTGAATTCATTCTCTTCATTTGAACTTGAAGTTCGCAACTTGGGGGAAAACCCACTTGGACAACCACCTACTAATCTCACATTGATGGCCCCCAGGCCCTGGCCAGGTGACCCCTCACTACCACAGTCAAATGAGGATAACATAATTGAATGCAGTGACCACATGTGCCCAATTCGAGTCCATTGGCATTTCAAGAACAACTATATGGATCATTGGAGGGTGAAGCTTACAATTTCCAACTACAACTACAAGGAGAAACTACTCAGACTGGAACGTATTGGTTCAACAATCCTGGTTTCAGCCAAAAAGCAACAACTTACAGCTTCAACAGCACTAAACTTCCAGCCGTTGGGCTCCAAGATGGAGTTTGCTCTTTTCTGGGGGATAGATTTTTACAACAGTGAGCTATTGCATTCTGATAAGGGTCGACAGGGTGTTGTGACAACAGAAATATTGTTGGAAAAAGATCCAAATTCTTTCACATTACGTAACGGATGGGCATTTCCGAGAAGAATATATTTCAACGGCGAGGATTGTGAAATGCCTTTACCTGACACGTTCCCTATGTTACCAAATGGTTTTGTAGTGTCTAGCACGCATCTACCTCAATTTTGA 1038 0.4181 MVLIIHHHVLKLISILITLCTLSDCYDPLDPNGNISVTFDIYQSTDNGYLARVTVQNNYLYRHVDKPGWKLGWTWANNEVIWSMNGAFATDRGNCLGYSGSQIPHSCKKDPTIVDLTPQVSQNRSENCCRGGLLSAWAIDPLNSFSSFELEVRNLGENPLGQPPTNLTLMAPRPWPGDPSLPQSNEDNIIECSDHMCPIRVHWHFKNNYMDHWRVKLTISNYNYKEKLLRLERIGSTILVSAKKQQLTASTALNFQPLGSKMEFALFWGIDFYNSELLHSDKGRQGVVTTEILLEKDPNSFTLRNGWAFPRRIYFNGEDCEMPLPDTFPMLPNGFVVSSTHLPQF 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00098 345 PANTHER PROTEIN COBRA 14 174 IPR006918 GO:0010215|GO:0016020
Sebi156g00098 345 Pfam COBRA-like protein 49 174 IPR006918 GO:0010215|GO:0016020
Sebi156g00098 345 PIRSF COBRA 177 344 IPR006918 GO:0010215|GO:0016020
Sebi156g00098 345 PIRSF COBRA 1 180 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00098 Sebi-Chr156 1561359 1563842 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00098 189 333 COBRA Gene Family AT3G02210 42.568 1.86e-37 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00098 - - vra:106760500 277.33