Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00079 ATGGTGAGTTTAGAATTATGGAGACCCAGTTATTGTTCTGAAAGCAAAAAGCATGTCAAAAACAAACGAAGCTTCGAAGAGTCTTTTGGACCTAAACCTTTGCCTTTACTAGTATGGAGTGGACAGCCAAATGAGGAAGATGACCGCAGTGAAAAGATGCACAGAGACATTCCCTCATCAAACAAGAACAACGAAGAAGAAAACTATTTGGTGGGGTGGCCACCAATTAAGTCATGGAGAAAGAAAGAACTACATCAGCAACATCCTGCTGCAAGAGGCCAGATTAGGAAAGATAGGATGCAAGTTAATGAGAATCAAAGTAGAGAATCAAATTCTTTATATGTCAAAGTTAACATGGAAGGGGTAGCAATAGGAAGGAAAATCAATTTGAGGCTTTACAACTCTTATCAGACTCTTACAAACAAGTTGATTAGCATGTTTGTTAAATACCAAAAGGTTGAGGAAGCTTCTGAAGCAAGTTATGCACTCACCTTTCAGAATGAACAAGGGGAATGGCTGCTTACTAGACATGTCCCATGGAAATCCTTCATTAGTACGGTGCGGCGTTTGGCGATAGTGAGGAATGGAAATGAAACTGTTTGA 603 0.398 MVSLELWRPSYCSESKKHVKNKRSFEESFGPKPLPLLVWSGQPNEEDDRSEKMHRDIPSSNKNNEEENYLVGWPPIKSWRKKELHQQHPAARGQIRKDRMQVNENQSRESNSLYVKVNMEGVAIGRKINLRLYNSYQTLTNKLISMFVKYQKVEEASEASYALTFQNEQGEWLLTRHVPWKSFISTVRRLAIVRNGNETV 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00079 200 MobiDBLite consensus disorder prediction 44 62 - -
Sebi156g00079 200 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 49 195 IPR003311 GO:0005634|GO:0006355
Sebi156g00079 200 MobiDBLite consensus disorder prediction 84 107 - -
Sebi156g00079 200 ProSiteProfiles PB1 domain profile. 112 200 IPR000270 GO:0005515
Sebi156g00079 200 MobiDBLite consensus disorder prediction 11 27 - -
Sebi156g00079 200 Pfam AUX/IAA family 16 196 IPR033389 -
Sebi156g00079 200 SUPERFAMILY CAD & PB1 domains 105 191 - -
Sebi156g00079 200 Gene3D - 106 199 - -
Sebi156g00079 200 MobiDBLite consensus disorder prediction 84 104 - -
Sebi156g00079 200 MobiDBLite consensus disorder prediction 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00079 Sebi-Chr156 1295897 1297187 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00079 90 192 B3 DNA Binding Superfamily AT3G61830 25.962 1.81e-08 51.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Sebi156g00079 AUX_IAA 1e-33 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00079 K14484 - gmx:100802759 306.99