Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00070 ATGAGTTCAATTCTCACTGACCATCTTCTCTCAATCGCCACCGCTTCAGATGCCGAAACCGATTTTCCCGCCAAATTACAACGGTCATCTTTCTCAACGGTCAAGTTTCACCCTGACAAGCCCAACGACCATGGTTCTTCTGATGTAGCAGTTTCATTTTCAAGTAGCAGAAGGAGAATATGCATAGCCACTTTGCCATGTCTTCTTCCCCTAACTCAGATCCTTGGTTGTCTCCGAGCCAACGCCATGCAGCCAGGTACAAAGGAATATCTTCTCATTAAAGAGGAGGTGAGGAAGGTATTGTCAAAAGGCAAGGCTGCAGGCGTGCTTCGTTTGGTTTTCCACGATGCTGGAACCTTTGAAGTCGATGACAATATAGGTGGTATGAATGGTTCTATAGTCTACGAACTTGAAAGACCTGAAAATGCTGGCCTGAAAAAATCAGTTCTGCAGAAAGCAAAGACTCAGATAGATGCTATCCAACCAGTATCCTGGGCGGACATGATTGCTGTGGCTGGAGCTGAAGCAGTTGAAATATGTGGAGGTCCACCTATCCAAGTATCACTGGGTAGACAAGATTCACTGGAGCCTGATCCTGAAGGCAAACTTCCTGAGGAAACTCTCGATGCTTCTGGTTTGAAGAAATGCTTCAAGAGAAAAGGCTTTTCAATAGACAACCTGGAGGTCAGGTTCGACAATCTGGAGAGGGGCTTCGAGAATCTTTTGGAGATGGCGCAAAATATTAACCAAACATTACAGCAAAAAGGGAACTCTTCAGGGGATAGTAGCAACGGCGCTGAAGGAAATCTTGGAGGACGAAACGAATCTAGGAGCGGAACAGTAGAGGAACCGTGGAGGAGATTGGAGATTCTGCTCTTTTCGGGAGACGATGCGTATGGGTGGGTGAACCGTGTGGAGAGATATTTCAATCTGAAAGGTGTCTTGGAACAAGAAAGGTTGCAAGCGGTGATGGTCGCAATGGAGGGAAAGACCCTTTCTTGGTTTCGTTGGTGGAGGTTTTGCCGTTCGAACCCATCATGGGAGGATTTCAAGGCAGCTGTCATTAGTAAATTTCAGCCAGAATTTGATCTTGATATCCGGGTTCAAGAAGATGGATCAGAATCTTGGGAGCAGGAATACAGAGGGAAAAATGAAACTTTGAAATTCAAGAACGAAGTTGTGGCAGAAAAAGAAAAGGAAAAAGAACTGGAACTGCATGTAGGTACAGTGGTGGAGGTCCAAGAAGCTGATGTTGCAAACAAGATTGAAGGGCAAGAGAGTGATGCAGATTTGGGTGATATAAAGACAAAGAAGGAATGCTTCAAAGAATGCTTCAAAGAAGATTTTCATTCTAAGGTGTCAGAGGCTGCCAAACGCCTTCATTTGAAGGAACATTTAGTCCTTGATGGATCTGGAAATGTTTTCAAATTAGCTGCACCAGTGGAATGCAAGGGCATTGTTGGTGGTGATGACCGGCACTATCTTCTTGATTTGTTGAGGGCCCAAGCAGCAGAGACATCAAAATCGAAGGAGAAGAATTCTGAAGGGGCAGACGACTTGGCCTCTGATTCTCAAAATGCCATTGATGCTGACAAGCCAGATATAACAGAGGAAGAAAAAACTGAGGATGTCAAAGAACTTACTTCTTCATCTACTGAAGCCTCTGGTTACCTATGCACACTTGAAGTTTCACCTATGGATGGCCAAACATTTAAGCAGAAACTAGAAGCTGGTCTTGGGGAGGCTTTTAAGGGGAGTTGGCTGCAGGAGAGTCTAAGGGGCTTTTCATTTGATCCTGGTGGAACTTGGCTTTCAGCAGCTACTAGCTATTCACCTTGA 1839 0.4497 MSSILTDHLLSIATASDAETDFPAKLQRSSFSTVKFHPDKPNDHGSSDVAVSFSSSRRRICIATLPCLLPLTQILGCLRANAMQPGTKEYLLIKEEVRKVLSKGKAAGVLRLVFHDAGTFEVDDNIGGMNGSIVYELERPENAGLKKSVLQKAKTQIDAIQPVSWADMIAVAGAEAVEICGGPPIQVSLGRQDSLEPDPEGKLPEETLDASGLKKCFKRKGFSIDNLEVRFDNLERGFENLLEMAQNINQTLQQKGNSSGDSSNGAEGNLGGRNESRSGTVEEPWRRLEILLFSGDDAYGWVNRVERYFNLKGVLEQERLQAVMVAMEGKTLSWFRWWRFCRSNPSWEDFKAAVISKFQPEFDLDIRVQEDGSESWEQEYRGKNETLKFKNEVVAEKEKEKELELHVGTVVEVQEADVANKIEGQESDADLGDIKTKKECFKECFKEDFHSKVSEAAKRLHLKEHLVLDGSGNVFKLAAPVECKGIVGGDDRHYLLDLLRAQAAETSKSKEKNSEGADDLASDSQNAIDADKPDITEEEKTEDVKELTSSSTEASGYLCTLEVSPMDGQTFKQKLEAGLGEAFKGSWLQESLRGFSFDPGGTWLSAATSYSP 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00070 612 ProSiteProfiles Plant heme peroxidase family profile. 106 227 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 Pfam Peroxidase 95 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 ProSitePatterns Peroxidases active site signature. 106 117 IPR019794 GO:0004601
Sebi156g00070 612 CDD plant_peroxidase_like 106 223 - -
Sebi156g00070 612 Coils Coil 224 244 - -
Sebi156g00070 612 MobiDBLite consensus disorder prediction 530 547 - -
Sebi156g00070 612 SUPERFAMILY Heme-dependent peroxidases 92 224 IPR010255 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 MobiDBLite consensus disorder prediction 253 278 - -
Sebi156g00070 612 ProSiteProfiles Clueless (Clu) domain profile. 138 509 IPR025697 -
Sebi156g00070 612 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 88 223 IPR044831 GO:0004601|GO:0034599
Sebi156g00070 612 MobiDBLite consensus disorder prediction 505 549 - -
Sebi156g00070 612 MobiDBLite consensus disorder prediction 253 276 - -
Sebi156g00070 612 Gene3D - 86 225 - -
Sebi156g00070 612 PRINTS Haem peroxidase superfamily signature 106 120 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 PRINTS Haem peroxidase superfamily signature 163 180 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 PRINTS Haem peroxidase superfamily signature 181 193 IPR002016 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 MobiDBLite consensus disorder prediction 188 207 - -
Sebi156g00070 612 FunFam L-ascorbate peroxidase 96 211 - -
Sebi156g00070 612 PRINTS Plant ascorbate peroxidase signature 106 121 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 PRINTS Plant ascorbate peroxidase signature 202 219 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 PRINTS Plant ascorbate peroxidase signature 124 134 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 PRINTS Plant ascorbate peroxidase signature 162 180 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 PRINTS Plant ascorbate peroxidase signature 181 193 IPR002207 GO:0004601|GO:0006979|GO:0020037
Sebi156g00070 612 Pfam Clustered mitochondria 443 505 IPR025697 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00070 Sebi-Chr156 1113372 1117944 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00070 93 227 Peroxidase AT1G14550 34.667 2.42e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00070 K00434 - gmx:100792735 320.857