Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00061 ATGGTGGCTTTCGGCGGGAAAAAAGTTGGCCAAATGGTCGTCGGCTTCGGCGGCAGCGGTCTCGGCCAGGTCGTCATCGCCGTCACAGTCTCCTTCCTTGTCCGCATCTTCTCTGCTCCCGGCCCCGCCCTCTTGCCGGAGAACGACGATGTGCCGAACAACGATTCCCACAACGGTGAAACTTCGCCCTCCGGAAAGGTCACGCCGGTTACAATCCGCTGGAACACGAAGCCTGGGAGATTGTTAGCCATAATGGGGCCTTCAGGTTCAGGGAAGACAACGTTGCTTAATGTTCTTGCGGGTCAGCTGGGAGCATCGCCATGGCTGCATTTGACGGGCCTTTTGGAGTTCAATGGAAAGCCTCGTTCCAAAAACCCTTACAAGTATGCTTGTTTGTTAGGAATTTGTGATTCCTGCGATTCTCGTAATGTTTCTTTTAAGTTGCTAATGCTATGGAGATCAATTACAATGGTGTGGTTTATTGCTGTAGAACTCCAGCTTCCAGACCTATCTTCCGCAGAAGAGAGAGATGAATACGTGAACAATCTCCTTTTCAAACTAGGCTTGATCAGTTGTGCTGATACCAATGTCGGTGATGCAAAAGTTCGTGGAATTAGCGGTGGTGAAAAGAAACGCTTATCAATGGCATGTGAATTGCTTGCAAGCCCGTCTGTTATATTTGCTGATGAACCCACAACAGGACTTGATGCCTTCCAGGCTGAGAAAGTCATGGAAACACTCCAACAGCTTGCACAAGATGGTCATACTGTAATTTGCTCTATACATCAGCCAAGAGGTTCAGTGTATAGTAAATTCGATGACATTGTCTTGCTGACTGAGGGTTCACATGTTTATGCTGGTCCTGCTCGTGATGAAGCATTGGCATACTTCTCAAGATTCGGGTACAACTGCCCAGATCATGTAAATCCTGCTGAATTTTTGGCTGATCTTATATCCATCGACTATAGTTCTGCTGATAGTGTCTATTCCTCTCGAAAAAGGATTGATGGGCTTGTGGAGTCATTCTCACAAAGACTATCTACAGTAATATATTCAACTCCAATTACTATAGACGATCTCTCAAAAAGTAGAAAGCAAATCAGAAAGAGGACTGTAGCAAAGAAGAAAGGAGGTTGGTGGAAGCAATTTTGGTTGCTCCTTAAACGAGCTTGGATGCAGGTTGCTGCAATAAATACAGCCATGGCTGCTCTCACAAAGACTGTAGGCGTGTTTCCCAAGGAACGGGCAATTGTTGATAGAGAACGTGCTAAAGGCTCCTATTCATTGGGTCCATATCTGTTTTCGAAATTGTTGACTGAGATTCCCATCGGAGCAGCATTTCCATTAATGTTTGGTGCAGTTTTGTATCCAATGGCACGTCTTCATCCTACTTTGACGAGATTTGGGAAGTTTTGTGGAATTGTCACTGTGGAATCTTTTGCTGCATCTGCGATGGGTCTTACTGTTGGTGCTATGGTTCCAACCACTGAAGCAGCAATGGCAGTAGGCCCCTCTCTTATGACAGTTTTTATTGTATTTGGTGGCTACTATGTCAATCCTGAGAATACCCCAATCATCTTCCGCTGGATTCCTAGTGTTTCTCTGATTAGATGTGGCCTTCAATTTGATCATCAGCATTCATTTGATGTTCAAACTGGAGAACAGGCATTGGAGCGTATCTCCTTTGGAGGAAGTAGGATTAGGGATACGGTGGTAGCACAAAGTAGAATACTGTTATTTTGGTATTGCACCACCTACCTTCTCCTTGAGAGAAACAAGCCCAGATACCAGCAACTTGAAACAACCCCTCTTGACCATGACGAACCCAATTTAAAACTTGAGGAGTTCAATTCTAAACAAGTTCATCAGGCACTTGAAGCTACACCAGTCAGCCAAATTGGATTGGTTCCGACCAGTCCCTTGAGTCACCTGAAGTAG 1938 0.453 MVAFGGKKVGQMVVGFGGSGLGQVVIAVTVSFLVRIFSAPGPALLPENDDVPNNDSHNGETSPSGKVTPVTIRWNTKPGRLLAIMGPSGSGKTTLLNVLAGQLGASPWLHLTGLLEFNGKPRSKNPYKYACLLGICDSCDSRNVSFKLLMLWRSITMVWFIAVELQLPDLSSAEERDEYVNNLLFKLGLISCADTNVGDAKVRGISGGEKKRLSMACELLASPSVIFADEPTTGLDAFQAEKVMETLQQLAQDGHTVICSIHQPRGSVYSKFDDIVLLTEGSHVYAGPARDEALAYFSRFGYNCPDHVNPAEFLADLISIDYSSADSVYSSRKRIDGLVESFSQRLSTVIYSTPITIDDLSKSRKQIRKRTVAKKKGGWWKQFWLLLKRAWMQVAAINTAMAALTKTVGVFPKERAIVDRERAKGSYSLGPYLFSKLLTEIPIGAAFPLMFGAVLYPMARLHPTLTRFGKFCGIVTVESFAASAMGLTVGAMVPTTEAAMAVGPSLMTVFIVFGGYYVNPENTPIIFRWIPSVSLIRCGLQFDHQHSFDVQTGEQALERISFGGSRIRDTVVAQSRILLFWYCTTYLLLERNKPRYQQLETTPLDHDEPNLKLEEFNSKQVHQALEATPVSQIGLVPTSPLSHLK 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00061 645 Pfam ABC-2 type transporter 394 540 IPR013525 GO:0016020|GO:0140359
Sebi156g00061 645 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 74 291 IPR027417 -
Sebi156g00061 645 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 51 305 IPR003439 GO:0005524
Sebi156g00061 645 ProSitePatterns ABC transporters family signature. 205 219 IPR017871 GO:0005524|GO:0016887
Sebi156g00061 645 MobiDBLite consensus disorder prediction 51 69 - -
Sebi156g00061 645 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 396 542 - -
Sebi156g00061 645 MobiDBLite consensus disorder prediction 45 69 - -
Sebi156g00061 645 Pfam ABC transporter 72 232 IPR003439 GO:0005524
Sebi156g00061 645 Pfam ABC-2 type transporter 262 319 IPR043926 GO:0140359
Sebi156g00061 645 Gene3D - 63 298 IPR027417 -
Sebi156g00061 645 SMART AAA_5 78 282 IPR003593 GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00061 Sebi-Chr156 998801 1007843 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00061 77 285 Calmodulin-binding Proteins AT2G36910 26.432 8.38e-07 50.4