Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00058 ATGTCGCATTTGCTGCACGGGAAGCTCGATGTGATGATATATGAAGTCGATACATTACAAACTCCGTGCAATTTCAATCTCTGTGACAAGGTGATTGGGATGGGTCTCTATGCAACAGTTGATTTAGATAAGGCAAGGGTTGGGAGGACTAGGATGTTAGATGATCAACCCTCTAACCCCAACTGGAATGAGACCTTTCACATATATTGTGCCCATTTAATCTCCAACATTATATTCACTGTCAAACAAAATAACCCCATTGGGGCTACTCTAATTGGAAGAGCTTATGTCCCTGTTGGCCAAGTTATTAAGGGCAATGTAGTGGATACATGGGTCCAGATATTAGATGAGAACCATCAACCCATACCAAGTGGCTCTAAAATTCATGTTAGAATGCAATACTTTGATGTCAAGAATGACTCAAACTGGTCTCAAGGAATAAAGAGTCCAGGATTTCAAGGAGTTCCACACACATTCTTTAGTCAAAAAACTGGTTGCAGAGTTACTTTGTACCAAGATGCTCATATTGCAGATGGTTTTGTGCCTAGGATCCCATTGTATGGAAAAAAACCTTATGAGCCTGGGAGATGCTGGGAGGATATTTACAATGCCATTATGGATGCTAATTACTTTATTTACATAACTGGTTGGTCTGTGTATACTGAAATAACCTTGATTAGGGACTCAAGGAAATCAAGTATTAAACTTGGGGATTTGCTTAAGATGAAAGCAGATGAAGGTGTTACTGTTCTTATGCTTATTTGGGATGACAGAACCTCTGTTCCAGACTTGAAGAAAGATGGCTTGATGGCAACTCATGATCAAGAAACTGCTGAATTTTTTAGAAACACAAAGGTGCATTGTGTTTTGTGTCCACGTGACCCTGGTGGTGGAAGAAGCATGGTTCAAGGTTTTGAAATCTCAACCATGTTTACTCACCACCAAAAGACTATTGTACTTGATAGCCAAGTTTATGGAGCTGTGGGAAGATGGCAAAAGAGAACAATCTCAAGCTTTATAGGTGGTATTGATTTGTGTGATGGAAGATATGATACACAAGAACATCCTCTATTTTCAACTCTTAACACAGTCCATCATGATGATTTCCATCAACCAAATTTCCCAGGTGCTTCAATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGACATATTGCTTGGGATGTATTGTGCAATTTGAGCAAAGATGGAGGAAGCAAGCTGGGAAGGAACTCCAACAATTCCTACTCCCTTCAAGCATTGTTCAGATCCATTGATGGTGGTGCTGCTTCTGGTTTCCCACAAGACCCTGATGAAGCTGCTGAATTAGGCCTTGTTAGTGGGAAAGATAACATCATTGATAGAAGCATTCAGGATGGTTACATAAATGCTATTAGGAGAGCAAAGAATTTCATCTACATTGAGAATCAGTATTTCCTAGGGAGTTCATATGGTTGGAAAGGATCTGATATTAAAGTTGAGGATATAAATGCTTTGCATCTTATACCAAAGGAGTTGTCATTAAAGATTGTTAGCAAGATTGAAGCAAGAGAGAGGTTTTCTGTCTACATTGTCATCCCAATGTGGCCAGAAGGTGTGCCTGAGAGTGAATCAGTTCAAGCTATATTAGATTGGCAAAGGAGGACAATGGAGATGATGTATACTGATATTGCTGAAGCCATCCGAAGAATGAGAATTAGAGCACACCCTAGGGATTACTTGACTTTTTTCTGCCTTGGAAATCGTGAGGGTATGGAAGGTAAAGAATATATCCCTTTGGAGACACCAGAGCCTGATAGTGATTATAGTAGAGCACAAAAGTCCAGGCGATTTATGATCTATGTTCATGCAAAGATGATGATAGTTGATGATGAATACATAATCATTGGTTCTGCCAACATAAACCAAAGATCAATGGATGGTGCAAGGGACAGTGAGATTGCAATGGGAGCATTCCAACCACGCCATTTAAGTGTAACATCAAGAGGACCACCAAAAGGACAGATATATGGATTGAGACGTGCATTATGGTATGAGCACCTTGGGGATGATGGTGATACAAACATCTTTGACAATCCAGAAAGTGTGAACTGCATCAAGCTTGTGAATCGTCTAGCTGAGACCAACTGGGACATATACTCACAGGAAACATTTGATGAACATAGAGCATTTCACCACCTCATGCGTTACCCTGTAGAAGTAACATATGATGGAGCCATAACAAACCTTCCAGGACTTGAATGTTTTCCTGATACCAAGGCTCGGATTCTCGGTTCCAAAGCACAGTACCTTCCTCCAATTCTCACCACCTAG 2334 0.4057 MSHLLHGKLDVMIYEVDTLQTPCNFNLCDKVIGMGLYATVDLDKARVGRTRMLDDQPSNPNWNETFHIYCAHLISNIIFTVKQNNPIGATLIGRAYVPVGQVIKGNVVDTWVQILDENHQPIPSGSKIHVRMQYFDVKNDSNWSQGIKSPGFQGVPHTFFSQKTGCRVTLYQDAHIADGFVPRIPLYGKKPYEPGRCWEDIYNAIMDANYFIYITGWSVYTEITLIRDSRKSSIKLGDLLKMKADEGVTVLMLIWDDRTSVPDLKKDGLMATHDQETAEFFRNTKVHCVLCPRDPGGGRSMVQGFEISTMFTHHQKTIVLDSQVYGAVGRWQKRTISSFIGGIDLCDGRYDTQEHPLFSTLNTVHHDDFHQPNFPGASIKKGGPREPWHDIHCKLEGHIAWDVLCNLSKDGGSKLGRNSNNSYSLQALFRSIDGGAASGFPQDPDEAAELGLVSGKDNIIDRSIQDGYINAIRRAKNFIYIENQYFLGSSYGWKGSDIKVEDINALHLIPKELSLKIVSKIEARERFSVYIVIPMWPEGVPESESVQAILDWQRRTMEMMYTDIAEAIRRMRIRAHPRDYLTFFCLGNREGMEGKEYIPLETPEPDSDYSRAQKSRRFMIYVHAKMMIVDDEYIIIGSANINQRSMDGARDSEIAMGAFQPRHLSVTSRGPPKGQIYGLRRALWYEHLGDDGDTNIFDNPESVNCIKLVNRLAETNWDIYSQETFDEHRAFHHLMRYPVEVTYDGAITNLPGLECFPDTKARILGSKAQYLPPILTT 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00058 777 PANTHER PHOSPHOLIPASE D 428 766 IPR015679 -
Sebi156g00058 777 Pfam C2 domain 7 113 IPR000008 -
Sebi156g00058 777 SUPERFAMILY Phospholipase D/nuclease 464 691 - -
Sebi156g00058 777 CDD C2_plant_PLD 4 135 - -
Sebi156g00058 777 Gene3D C2 domain 5 147 IPR035892 -
Sebi156g00058 777 Gene3D Endonuclease Chain A 436 660 - -
Sebi156g00058 777 FunFam Phospholipase D 431 664 - -
Sebi156g00058 777 Pfam Phospholipase D Active site motif 309 349 IPR001736 GO:0003824
Sebi156g00058 777 Pfam Phospholipase D Active site motif 619 645 IPR001736 GO:0003824
Sebi156g00058 777 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 4 137 IPR035892 -
Sebi156g00058 777 SMART C2_3c 8 111 IPR000008 -
Sebi156g00058 777 ProSiteProfiles C2 domain profile. 1 112 IPR000008 -
Sebi156g00058 777 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 309 349 IPR001736 GO:0003824
Sebi156g00058 777 Gene3D Endonuclease Chain A 187 422 - -
Sebi156g00058 777 SMART pld_4 309 349 IPR001736 GO:0003824
Sebi156g00058 777 SMART pld_4 618 645 IPR001736 GO:0003824
Sebi156g00058 777 PIRSF PLD_plant 1 414 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi156g00058 777 PIRSF PLD_plant 411 777 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi156g00058 777 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 618 645 IPR001736 GO:0003824
Sebi156g00058 777 Pfam Phospholipase D C terminal 695 767 IPR024632 -
Sebi156g00058 777 SUPERFAMILY Phospholipase D/nuclease 140 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00058 Sebi-Chr156 962445 966048 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00058 3 777 Phospholipase D Gene Family (Wang group) AT3G15730 63.514 0.0 1039
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00058 K01115 - gmx:100791688 1234.55