Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00057 ATGCCTCAGCTGCTACATGGGACGCTTAAGGTAACCATAAATGAAGTTGATAGGCTGCACACTGGATGTAATTTGGATTTCTTGCAGAAGGGCACAACACATAAGACGAAGAGATTTCTAGCCCAAGTCAAGGGTTGTCTTCTATGCCGGCCTGAGGCAAGAGTTGCAAGGACCAGAATGATAGGAAATCAACCCTCCAACCCGAAGTGGAAGGAAACCTTTGAAATCTATTGTGCTCATAATGTCTCAAACATTATATTCACTGTCAAAGATGGTAATCCAATTGGTGCAACTCTAATTGGAAGAGCTTATGTCCCTGCTAACCATGTTATCAAGGGCCCTATAATTAACAGATGGGTTGAGATAATAGATGATGAAGATCATCGTCCTGTTAGGGGTCACTCTAAAATTTGTGTCAGTGTGCAATTCACAAGTGTTACTGAGGATAAAAAATGCCAATGGTCTCAAGGAATATGCATGCCATTTATGGGAGTTCCTCGTACATTTTTCAACCAAAGAGAAGGTTGTAATGTCACTTTATACCAAGATGCACATGCTCCTGATAATGCACTCCCTTGGATTCCAATTTCAGGTACAAAATATTATGTGCCTGGGAGATGTTGGGAGGACATTTACAATGCCATTGTGGAAGCTAAGTACTTTATTTATATAACTGGTTGGTCTGTGTATACTGAAATAACCTTGATTAGGGATGCAAAGAATTTAAAAACAAGTGTCAAACTTGGGGAGTTGCTTAAGATGAAAGCTGATGAAGGGGTTAATGTTCTTATGCTTGTTTGGGATGACAGAACCTCTGTTCCAGACTTGGAAAAAGATGGCTTGATGGCAACCCATGATCAAGAAACTGCTGATTATTTTAGAAACACAAAGGTGCATTGTGTTTTATGCCCACGTGACCCTGGTGGTGGAAGAAGCATGGTTCAAGGTTTTCAAATCTCAACAATGTTTACTCACCACCAAAAGACTATAATACTTGATAGCAAAATTGAAGGATTGAAAAAGAGAAAGGTCATAAGTTTCATAGGTGGTCTTGATCTTTGTGATGGGAGATATGATACTAGGGAACATCCTTTATTTTCAACTCTGAATACAGTCCATCATGATGATTTCCATCAGCCAAATTTCCCAAGTGCTTCCATCAAGAAAGGTGGTCCAAGAGAGCCATGGCATGACATTCATTGCAAGCTAGAAGGACCTATTGCATGGGATGTCTTGTATAATTTTGAGCAAAGGTGGGAGAAGCAAGCTGGGAAGGAATTCCAACAATTCCTATTCCCACTTGATGTGCTTGATAGATTTCTAGTCCATCCATCTGAAGCAGTGCCATCAGAAGATGGGGACATGTGGAATGTTCAGTTGTTTAGGTCCATTGATGGTGGTGCTGTCTCTAACTTCCCTCAAGCCCCAGATGAAGTTGCTGAATTAGGCCTTGTTAGTGGCAAAAATAACATCATTGATAGAAGTATTCAGGATGCTTATATAAATGCTATTAGGAGAGCAAAGAATTTCATTTACATTGAAAACCAGTATTTCCTAGGGAGTTCATATGGTTGGAAACCATCTGAGTCTGTGTCTGATATAAAAATTGAGGATATTAATGCTTTGCATCTTATACCAAAGGAGCTGTCATTGAAGATTGTTAGCAAGATTGAAGCAGGAGAAAGGTTTGTTGTGTATGTGGTGATACCAATGTGGCCAGAAGGTGTACCTGAAAGTGTTTCTGTTCAGGTAATATTAGGTTTGCAAAGAAGGACTATGGAGATGATGTATTCTGACATTGCTGATGCCATAAAGAAGAAGAACATTGAAGCACACCCTAGGGATTATTTGACATTTTTTTGCCTTGGCAAGAGGGAGAGAAAAACAGAAGGAGAATATATTCCTCCAGAGGAACCAGAACCTGACAGTGACTATCAAAGAGCACAAAATGCTAGGAGGTTCATGATCTATGTTCATTCCAAGATGATGATTGTGGATGATGAATACATAATCATTGGTTCTGCTAACATCAACCAGAGATCAATGGATGGTGGAAGAGACACAGAGATTGCAATGGGAGCATTCCAACCACATCATCTAACATCCCTTGGCCCAAAAAGACCACAAGGTCAGATTTATGGGTTCAGGAGAGCATTATGGTATGAGCATATTGGGGATTCTCATGAGGCTTTTGATGAGCCTGAAAGTGAGGAATGTGTGAAACTTGTGAATGGTGTTGCTGAGATGAACTGGGAATTATACTCCAAAGACACACTTGATGAAAGTGATCAACCAGTTCACCTTTTGAGATATCCTATAGAAGTGGCCAAAGATGGAACTATAACAACACTGCCAGGGCATGAATTTTTTCCTGACACCAAGGCTCCTATTCTTGGTTCACAAAATTCTAATTTTCTTCCTCCAATCCTCACTACCTAG 2439 0.4014 MPQLLHGTLKVTINEVDRLHTGCNLDFLQKGTTHKTKRFLAQVKGCLLCRPEARVARTRMIGNQPSNPKWKETFEIYCAHNVSNIIFTVKDGNPIGATLIGRAYVPANHVIKGPIINRWVEIIDDEDHRPVRGHSKICVSVQFTSVTEDKKCQWSQGICMPFMGVPRTFFNQREGCNVTLYQDAHAPDNALPWIPISGTKYYVPGRCWEDIYNAIVEAKYFIYITGWSVYTEITLIRDAKNLKTSVKLGELLKMKADEGVNVLMLVWDDRTSVPDLEKDGLMATHDQETADYFRNTKVHCVLCPRDPGGGRSMVQGFQISTMFTHHQKTIILDSKIEGLKKRKVISFIGGLDLCDGRYDTREHPLFSTLNTVHHDDFHQPNFPSASIKKGGPREPWHDIHCKLEGPIAWDVLYNFEQRWEKQAGKEFQQFLFPLDVLDRFLVHPSEAVPSEDGDMWNVQLFRSIDGGAVSNFPQAPDEVAELGLVSGKNNIIDRSIQDAYINAIRRAKNFIYIENQYFLGSSYGWKPSESVSDIKIEDINALHLIPKELSLKIVSKIEAGERFVVYVVIPMWPEGVPESVSVQVILGLQRRTMEMMYSDIADAIKKKNIEAHPRDYLTFFCLGKRERKTEGEYIPPEEPEPDSDYQRAQNARRFMIYVHSKMMIVDDEYIIIGSANINQRSMDGGRDTEIAMGAFQPHHLTSLGPKRPQGQIYGFRRALWYEHIGDSHEAFDEPESEECVKLVNGVAEMNWELYSKDTLDESDQPVHLLRYPIEVAKDGTITTLPGHEFFPDTKAPILGSQNSNFLPPILTT 812
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00057 812 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 654 681 IPR001736 GO:0003824
Sebi156g00057 812 Pfam Phospholipase D Active site motif 321 357 IPR001736 GO:0003824
Sebi156g00057 812 Pfam Phospholipase D Active site motif 655 681 IPR001736 GO:0003824
Sebi156g00057 812 PIRSF PLD_plant 1 812 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi156g00057 812 CDD PLDc_pPLD_like_1 198 371 - -
Sebi156g00057 812 ProSiteProfiles C2 domain profile. 1 120 IPR000008 -
Sebi156g00057 812 SUPERFAMILY Phospholipase D/nuclease 493 737 - -
Sebi156g00057 812 Gene3D Endonuclease Chain A 197 433 - -
Sebi156g00057 812 SUPERFAMILY Phospholipase D/nuclease 165 433 - -
Sebi156g00057 812 Pfam C2 domain 43 121 IPR000008 -
Sebi156g00057 812 PANTHER PHOSPHOLIPASE D 4 800 IPR015679 -
Sebi156g00057 812 SMART pld_4 321 357 IPR001736 GO:0003824
Sebi156g00057 812 SMART pld_4 654 681 IPR001736 GO:0003824
Sebi156g00057 812 Gene3D Endonuclease Chain A 463 699 - -
Sebi156g00057 812 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 321 357 IPR001736 GO:0003824
Sebi156g00057 812 FunFam Phospholipase D delta 198 431 - -
Sebi156g00057 812 SMART C2_3c 8 119 IPR000008 -
Sebi156g00057 812 Pfam Phospholipase D C terminal 729 800 IPR024632 -
Sebi156g00057 812 Gene3D C2 domain 6 155 IPR035892 -
Sebi156g00057 812 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 3 145 IPR035892 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00057 Sebi-Chr156 956865 960933 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00057 3 812 Phospholipase D Gene Family (Wang group) AT3G15730 62.652 0.0 1031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00057 K01115 - gmx:100794115 1210.28