Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00036 ATGTCAGCATCTCGAATTTTTTACACCATTAATGAATGCATCTCCTTGGTACAATCAGATTCCCATGAAGCTCAAGAGAAAGGTCTTCAAACGCTAGCTGCTATCACCAAGGTGAGTCCTCAAAACAGAACCTTGCTAGCTCAAACAGATGGAGCAATCCCAACACTTGCAACACTGACAAATGCTTCCTCTCCCATTATCCAAACACTTTCCTTGTTGATCCTCTTTAACCTTTCCCTAAATCCTGATCTAAAACAGTCTCTTGCTGATATGGAAACCATTTATTACCTAAATTCCCTAATTAGCTCATCAAGCTATTCTCTTGATTCCTGCAAACTTGCCTCCTCATTGATTTGCAGTTTGTCCATGCATGATAAAAACAAGGCCAAATTTGGGGTAGCAGGTACAGTTCAGTTGCTTGTGAAGGCTATTAAAGGCTCTGGTGACTCTGATGCTCATCACCTTATGAGTTCTTTGGCAGAGCTTGTGCTGTTCCATGGAAACTGCACTTTGGCAGTGAGAGCTGGAGCAGTTCCAGTGCTACTGCAAGTTGTAGAGAACACTGAAAATGAGGACTTGGCTGGAACATCTCTTACTGTTCTTGGTCTTCTTGCAAGGTTTGATGAAGGGCTAAGTGGTCTGAAGAAAAACGAATCAGATAATTGGTTCAATGTTAAGTGTGTTGAGAGGGAGGTCTTTGTTGAGTAA 708 0.4195 MSASRIFYTINECISLVQSDSHEAQEKGLQTLAAITKVSPQNRTLLAQTDGAIPTLATLTNASSPIIQTLSLLILFNLSLNPDLKQSLADMETIYYLNSLISSSSYSLDSCKLASSLICSLSMHDKNKAKFGVAGTVQLLVKAIKGSGDSDAHHLMSSLAELVLFHGNCTLAVRAGAVPVLLQVVENTENEDLAGTSLTVLGLLARFDEGLSGLKKNESDNWFNVKCVEREVFVE 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00036 235 PANTHER U BOX DOMAIN-CONTAINING 15 215 - -
Sebi156g00036 235 Gene3D - 114 217 IPR011989 -
Sebi156g00036 235 SUPERFAMILY ARM repeat 9 214 IPR016024 -
Sebi156g00036 235 Gene3D - 9 113 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00036 Sebi-Chr156 607662 608369 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00036 10 216 U-box Gene Family AT1G23030 24.638 1.28e-13 67.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00036 - - gmx:121174819 306.219