Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00031 ATGGCAAAGAAGAAGATGTTCAAAAGGCTATGTGCTAGCCCTGACGAGGCCACAGCAAATGATGAGGAAGATAGAGATCACATAGAAAATATTGAACAAATGTCTATGGACGATTATGGAAGCCAATACAGCCTCACTGGCATTCCTCTTCCTCCTCTTGGTGCCACCGCTGCCGCCACCACCCGGAGACCCAAGCTCCGACGTTGCATTATTTCCCCATATAACCCTCGTTACAGAATGTGGGATAAATTTCTGTTGCTTTTAGTTTTCTACACGGCATGGGTGAGCCCGTTTGAATTTGGATTCCTGAATGAACCAGTGGATCCTATTTCTGTTGCGGACAATTTTGTCAACTTTTTCTTTGCATTGGACATTTTCTTGACTTTCTTTGTTGCGTATCATGACAAGACAACACATTTGCTTGTGGATGAACCAAAGCTCATTGCTAAGAGATATATCAAAACATGGTTGATAGTTGATGTCATAGCAACCTTTCCTTCTGAAGTTGCTCACAAAGTGTTGCCTGGTCCTCTTAAGACATATGGCTACTTCAGTATGCTGCGCCTTTGGCGTCTCCGTAGAGTCAGTGCCATGTTTGCAAGATTAGAAAAGGATAGGAATTATAACTATTTCTTGGTGCGCTGTTTAAAGCTTATATGTGTTACTTTGTTTACTGTGCATTTTGCTGCCTGCTTTTTCTTCTTTCTCACTGTCAATCATGACGCGAAATCAACATGGCTTGGACTTATTTCTGATGCCACTGAGAAGAGTCTCACTGGTAACTACATAACATCAGTATATTGGTCTATAATGACTCTTTCAACTGTTGGTTATGGTGATCTGCATCCTGTGAACACAAAGGAGATGATATTTGACATAATCTTTATGCTCTTCAATTTGGGACTAACATCATATCTTATTGGAAACATGACAAATTTAGTTGTTCACGGAACAAGCAGAACTAGGAGATATAGAGACACAGTGCAAGCTGCTGCAGGATTTGCTAGCAGGAATCAGTTACCTATCCGCTTACAAGAACAAATGTTTTCTCATTTGTTTATGAAGTATAGAACTGATCTAGAAGGTCTGCAGCAACAAGAGATCATTGATTCCCTTCCTAAAGCTATTCGATCTAGTGTCTCACACTACCTATTCTATTCATTTGTGGACAAATTATACTTGTTTCATGGAGTGTCACATGACCTACTCTTTCAACTGGTCACAGAGATGAAGGCTGAGTATTTTCCCACAAAGGAAGATGTGATTTTGGAGAATGAAGCGCCAACAGACTTTTATATCTTTGTCACTGGTTCTGCAGAACTTATTATACGAAAGAATGGAATAGAACATGTAGTTGGTGAGGCAAAGGCAGGAGATGTTGTTGGAGAAATAGGAGTTCTATGTTACAGGCCACAGCTGTTTACAGTTCGAACCAAACGATTGAGCCAACTTCTGCGCTTGAATCGTACTACATTTCTAAATCTTGTTCATTCAAATGTTGGAGATGGGACAATAATCATGAACAATTTTCTCCACGTATATAAAATTTTTGTGCAATTATGA 1563 0.3986 MAKKKMFKRLCASPDEATANDEEDRDHIENIEQMSMDDYGSQYSLTGIPLPPLGATAAATTRRPKLRRCIISPYNPRYRMWDKFLLLLVFYTAWVSPFEFGFLNEPVDPISVADNFVNFFFALDIFLTFFVAYHDKTTHLLVDEPKLIAKRYIKTWLIVDVIATFPSEVAHKVLPGPLKTYGYFSMLRLWRLRRVSAMFARLEKDRNYNYFLVRCLKLICVTLFTVHFAACFFFFLTVNHDAKSTWLGLISDATEKSLTGNYITSVYWSIMTLSTVGYGDLHPVNTKEMIFDIIFMLFNLGLTSYLIGNMTNLVVHGTSRTRRYRDTVQAAAGFASRNQLPIRLQEQMFSHLFMKYRTDLEGLQQQEIIDSLPKAIRSSVSHYLFYSFVDKLYLFHGVSHDLLFQLVTEMKAEYFPTKEDVILENEAPTDFYIFVTGSAELIIRKNGIEHVVGEAKAGDVVGEIGVLCYRPQLFTVRTKRLSQLLRLNRTTFLNLVHSNVGDGTIIMNNFLHVYKIFVQL 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00031 520 PANTHER POTASSIUM CHANNEL AKT1 41 512 IPR045319 GO:0005249|GO:0006813
Sebi156g00031 520 CDD CAP_ED 394 499 IPR000595 -
Sebi156g00031 520 ProSiteProfiles cAMP/cGMP binding motif profile. 394 496 IPR000595 -
Sebi156g00031 520 SUPERFAMILY Voltage-gated potassium channels 73 315 - -
Sebi156g00031 520 MobiDBLite consensus disorder prediction 8 23 - -
Sebi156g00031 520 FunFam Potassium channel KAT2 382 517 - -
Sebi156g00031 520 SUPERFAMILY cAMP-binding domain-like 319 511 IPR018490 -
Sebi156g00031 520 FunFam Potassium channel KAT3 80 316 - -
Sebi156g00031 520 Pfam Cyclic nucleotide-binding domain 414 499 IPR000595 -
Sebi156g00031 520 Gene3D - 80 315 - -
Sebi156g00031 520 PRINTS EAG/ELK/ERG potassium channel family signature 114 124 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sebi156g00031 520 PRINTS EAG/ELK/ERG potassium channel family signature 262 279 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sebi156g00031 520 PRINTS EAG/ELK/ERG potassium channel family signature 91 98 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sebi156g00031 520 PRINTS EAG/ELK/ERG potassium channel family signature 288 299 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sebi156g00031 520 PRINTS EAG/ELK/ERG potassium channel family signature 306 315 IPR003938 GO:0005249|GO:0006813|GO:0016020
Sebi156g00031 520 SMART cnmp_10 394 511 IPR000595 -
Sebi156g00031 520 MobiDBLite consensus disorder prediction 1 23 - -
Sebi156g00031 520 Gene3D Jelly Rolls 362 517 IPR014710 -
Sebi156g00031 520 Pfam Ion transport protein 79 321 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00031 Sebi-Chr156 566099 569095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00031 32 515 Ion Channels AT2G25600 63.786 0.0 638
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00031 K21867 - gmx:100802964 757.288