Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00012 ATGGATTATTCGTGGGATTCTTCTATTGATGTGGAAACATTGGCTAAGATATTGGATGATTTGAACTGTTATGAAGCAGAGTTACATGCAGAAGGTGTTAATGCCTCAGGGGTTGACAAAGATGGTCAGGCTCCTTTTGTGGATGATGAGCATTTAAACAACAATTCTGGTGATGAAGCAAATGGAGGTATTGAAGGTCAGGTCTGCATTCATATCAATAGTGAGCACGACATAACTAACATGGATTGGGATAGTTTTGTTCCTAATGACATTAGTAAATATGACTTTGCTAATATGGATTTATCCTACAAGTTCTATAAAGCATATGGCAAAGCCAATGGTTTTAGTGTTCGAAAAGGAAAGATCCTATATAGCAAGAAAACTGGTGAAGAATTGCAACGAGAGTATTTTTGTTCCAACAATGGTCTCTGTGAAGACAGAGGTCTTACAATGGAAAATAGGAAACAGGAGCCTAGATGTGAAACTAGGTGTGATTGTAAAGCAACTTTTCGTGCTCATGTTGACATAATTACCAAGCGTTGGTATGCCACTGTTTTTAATGATAATCATAATCATGAGCTGTTTGGGACCAAAATATTCTGGAATGCTTCCTGGGCATAG 621 0.3768 MDYSWDSSIDVETLAKILDDLNCYEAELHAEGVNASGVDKDGQAPFVDDEHLNNNSGDEANGGIEGQVCIHINSEHDITNMDWDSFVPNDISKYDFANMDLSYKFYKAYGKANGFSVRKGKILYSKKTGEELQREYFCSNNGLCEDRGLTMENRKQEPRCETRCDCKATFRAHVDIITKRWYATVFNDNHNHELFGTKIFWNASWA 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00012 206 Pfam FAR1 DNA-binding domain 104 195 IPR004330 -
Sebi156g00012 206 PANTHER FAR-RED IMPAIRED RESPONSIVE (FAR1) FAMILY PROTEIN-RELATED 51 194 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00012 Sebi-Chr156 342185 342898 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Sebi156g00012 FAR1 9.4e-19 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00012 - - tpra:123913749 138.272