Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00009 ATGGAAAGTGATGAACTGAGAGTGGCTAGTGCACGCATTGGCAGCTCCAGCATCTGGAGAAGTGGTGCTGTTGATGTGTTTTCAGGTTCTTCACGCAGAGATGATGATGAACAAGAGCTTAAGTGGGCTGCAATTGAGAAACTTCCCACTTATCTACGCATGACAAGGGGTATACTCACTGAGGCAGAAGGTCAACTTACAGAGATTGATATTAACAAACTTGGACCCTTACAGAGGAAGAATTTGGTGGAGAGGCTTGTCAAGATTGCAGAGGAAGATAATGAAAAGTTCTTGTTGAAAGTTGGACTTGATATTCCCACAATTGAAGTCCGTTTTGAGCACTTGAATGTTGAAGCTGAAGCTCATGTAGGAAGAAGAGCATTGCCTACAATCTTTAACTTCTCCATTAATTTGTTTGAGGGGTTCCTTAATAATCTTCACCTTATTCCCACTAGAAAGAAGCCATTCACAGTTCTTCATGATGTTAGTGGAATCATCAAGCCTAAAAGAATGACACTGCTCTTAGGCCCTCCAAGTTCAGGAAAGACCACATTATTGTTGGCACTGGCTGGAAGACTTGGTAAAGATCTAAAATTTTCAGGGAGAGTTGCATATAATGGTCATGGAATGGAGGCATTTGTACCTCAGAGAACATCAGCTTACATAAGTCAAACTGATGTGCACATAGGAGAAATGACAGTACGAGAAACATTGGCCTTTTCAGCAAGGTGTCAAGGGATAGGAACACGTTATGAGATGCTGGAAGAATTATCAAGAAGGGAGAAGGCTGCAAACATTAAGCCAGATCCTGATCTTGATATTTATATGAAGGCAGCAGCACTAGAAGGCCAAGAGACCAATGTTGTTACTGATTATATAATTAAGATTTTGGGACTAGATGTTTGTGCTGATACCTTGGTAGGGGATGACATGATCCGGGGTATTTCTGGTGGACAAAAGAAGAGAGTCACAACTGGTGAGATGCTAGTTGGACCAGCAAGAGCACTTTTCATGGATGAAATATCAACTGGTTTGGACAGTTCTACCACATTCCAAATGATTAATTCACTAAGACAATCTATCCACATTCTGAATGGAACAGCTGTCATCTCTCTTCTCCAGCCAGCACCAGAAACTTATGAGTTATTTGATGATATAATTCTTCTCTCAGATGGACAAATTGTCTATCAAGGTCCAAGGGAAAATGTTCTTGAGTTCTTTGAATACATGGGTTTCAAATGTCCTGAGAGGAAAGGAGTAGCAGACTTTTTACAAGAAGTAACATCAAGAAAGGATCAAGAACAGTACTGGGCAAACAAAGATGAACCATATACCTTTATCACTGTTAAACAATTTGCTGAAGCTTTTCAGTCATTTCACATTGGTAGAAAACTTGGTGATGAACTTGCTACTCCATTTGACACCTCCAAAGGCCACCCTGCTGCTTTAACAAAAAACAAGTATGGTGTGAGCAAGAAGGAACTTCTAAAAGCATGTGTATCAAGAGAATTCCTACTTATGAAAAGGAATTCCTTTGTCTATATTTTCAAGATGTGGCAGTTGATTTTCACTGGCTTAGTAACAATGACATTGTTCCTACGAACTGAGATGCACCGGGATACAGAAACTGATGGTGGGATCTACATGGGTGCCTTGTTCTTCATACTAATTGTAATTATGTTCAATGGATATGCTGAGTTATCCATGTTCATCATGAAACTTCCTGTTTTCTATAAGCAAAGGGAGCTTCTCTTTTTTCCTGCTTGGGCATACTCTTTGCCTACATGGATCCTTAAGATTCCTATCACCTTAGTAGAAGTTGGTATTTGGGTTGTGATGACTTACTATGTCATAGGATTTGATCCAAGTTTTGAAAGGTTCATCAAACAGTACTTTCTGCTAGTTTGTATCAACCAAATGGCATCTGGACTTTTTCGATTCATGGGGGCAGTTGGGAGGAACATTATTGTTGCAAACACAGTTGGATCATTTGCTTTACTTGCAGTTTTGGTCATGGGTGGATTTATCCTATCTAGAGTTGATGTGAAGAAGTGGTGGTTGTGGGGTTACTGGGTCTCCCCCATGATGTATGGACAGAATGCTATAGCTGTCAATGAATTCCTTGGAAAGAGTTGGTCACATATTCCACCTGGTTCAACAGAACCATTAGGAGTACAGGTCTTGAAGGCACGTGGGATTTTCCCTGAAGCATACTGGTATTGGATTGGAGTTGGAGCTTCCATTGGATACATGTTACTATTCAACTTCCTTTTCCCATTGGCCTTACATTATCTTGACCCATTTGGTAAACCCCAAGCCTTAATATCAGAAGAAGCCTTAGCTGAGAGAAATGCTAGCACAAATGGACATATCATTGAACTGTCTCCTATATTTGATGGTTCTTCTGCTAAAGGGAATGAAAGTAGAAGGAGTTTGTCTTCCAGAACGCCATCAGCAAGAGTTGGCAGCATTGTTGCAGCTGATAACACCAGGAAGCGAGGGATGATTCTTCCTTTCACACCCCTTTCTATCACTTTTGATGAAATCAGATATGTAGTGGACATGCCACAGGAAATGAAGGCTCAAGGCATTCTTGAAGATCAACTTGAACTCTTGAAGGGTGTTAATGGAGCTTTTAGACCAGGAGTTCTAACAGCTCTAATGGGTATAAGTGGAGCTGGTAAAACAACTCTAATGGATGTGTTGTCTGGAAGGAAAACAACAGGATATATTCAAGGACAAATCACTATATCAGGGTACCCTAAAAAGCAAGAAACATTTGCTCGCATATCAGGATACTGTGAGCAGACTGATATCCACTCTCCCCATGTTACAGTCTATGAGTCTCTAGTTTATTCTGCATGGCTCAGGTTACCCTCTGAGGTTGATTCTGCCACAAGAAAGATGTTCATTGAGGAAGTTATGGAGCTTGTAGAGCTGACTCCATTAAGAGAAGCCCTTGTTGGATTGCCTGGAGTGAATGGTCTGTCCACTGAGCAGAGAAAGAGATTGACAATTGCAGTTGAACTTGTTGCCAATCCATCTATTATATTCATGGATGAACCTACCTCTGGCCTTGATGCCAGAGCTGCTGCTATAGTAATGAGAACAGTGAGGAATACAGTGGATACAGGGAGAACTGTGGTCTGCACAATTCACCAGCCTAGCATTGATATATTTGATGCTTTTGATGAGCTACTTCTCTTGAAGCGTGGAGGTGAGGAAATATATGTGGGGCCTTTAGGCAGGCATTGTTCTCATTTGATCAATTACTTTGAGGGAATTAATGGAGTGCCAAAAATTAAGAATGGTTATAATCCTGCCACTTGGATGTTGGAGGTTACTTCAGAAGCACAAGAAGCAGCTCTTGGAGTTAACTTTGCTGAAATATACAAGAATTCCGACCTATATAGGAGGAACAAGGCCTTGATCAGGGAACTTAGTACACCACCAGCACGTTCTAAAGACTTATACTTCACAACACAGTACTCTCAGTCTTTCATAACTCAATGCATGGCTTGCCTTTGGAAACAGCGCCTATCATACTGGAGAAATCCCCCATATAGTGCAGTGAGACTTTTGTTCACAACAGTCATAGCTGTGTTGTTTGGGACAATATTTTGGGATCTTGGCTCCAAATGGCAAAGAAAACAAGATCTATTTAATGCTATGGGATCCATGTATGCTGCAGTCCTCTTCATTGGGGTGCAAAATGCTACATCTGTGCAACCAGTTGTAGCCATTGAGAGAACAGTCTTCTATAGAGAAAGAGCTGCTGGAATGTACTCAGCTTTGCCATATGCATTTGGACAGGTTGCTGTTGAGATTCCATACATATTCATTCAAACCCTTGTATATGGGGTTATAGTGTATGCCATGATTGGCTTTGATTGGACAGGAAGCAAGTTCTTTTGGTATCTCTTCTTCATGTTCTTCACATTTTTATACTTCACCTTATTTGGAATGATGCTTGTGGGTGCTACCCCGGATCACAGTGTTGCTGCTATAGTTTCCTTTGGGTTCTACTTGATATGGAACCTTTTCTCAGGATTTGTGATTCCCAGAACTAGGATGCCGGTATGGTGGAGATGGTTCTTCTGGATTTGTCCTGTCTCTTGGACATTATATGGATTGGTTACTTCACAATTTGGTGATATAAAGGAACGTATGGAGAGTGGAGAGATTGTGGAAGAGTTTGTTAGGAGTTATTTTGGGTATAGAGATGATTTCAAAGCCATAGCTGCAGTTGTGGTCGTTGCCTTTTCACTAATCTTTGGATTTACCTTTGCCTTTTCAATTAAGGCATTCAATTTCCAAAAGAGATGA 4326 0.4089 MESDELRVASARIGSSSIWRSGAVDVFSGSSRRDDDEQELKWAAIEKLPTYLRMTRGILTEAEGQLTEIDINKLGPLQRKNLVERLVKIAEEDNEKFLLKVGLDIPTIEVRFEHLNVEAEAHVGRRALPTIFNFSINLFEGFLNNLHLIPTRKKPFTVLHDVSGIIKPKRMTLLLGPPSSGKTTLLLALAGRLGKDLKFSGRVAYNGHGMEAFVPQRTSAYISQTDVHIGEMTVRETLAFSARCQGIGTRYEMLEELSRREKAANIKPDPDLDIYMKAAALEGQETNVVTDYIIKILGLDVCADTLVGDDMIRGISGGQKKRVTTGEMLVGPARALFMDEISTGLDSSTTFQMINSLRQSIHILNGTAVISLLQPAPETYELFDDIILLSDGQIVYQGPRENVLEFFEYMGFKCPERKGVADFLQEVTSRKDQEQYWANKDEPYTFITVKQFAEAFQSFHIGRKLGDELATPFDTSKGHPAALTKNKYGVSKKELLKACVSREFLLMKRNSFVYIFKMWQLIFTGLVTMTLFLRTEMHRDTETDGGIYMGALFFILIVIMFNGYAELSMFIMKLPVFYKQRELLFFPAWAYSLPTWILKIPITLVEVGIWVVMTYYVIGFDPSFERFIKQYFLLVCINQMASGLFRFMGAVGRNIIVANTVGSFALLAVLVMGGFILSRVDVKKWWLWGYWVSPMMYGQNAIAVNEFLGKSWSHIPPGSTEPLGVQVLKARGIFPEAYWYWIGVGASIGYMLLFNFLFPLALHYLDPFGKPQALISEEALAERNASTNGHIIELSPIFDGSSAKGNESRRSLSSRTPSARVGSIVAADNTRKRGMILPFTPLSITFDEIRYVVDMPQEMKAQGILEDQLELLKGVNGAFRPGVLTALMGISGAGKTTLMDVLSGRKTTGYIQGQITISGYPKKQETFARISGYCEQTDIHSPHVTVYESLVYSAWLRLPSEVDSATRKMFIEEVMELVELTPLREALVGLPGVNGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFDAFDELLLLKRGGEEIYVGPLGRHCSHLINYFEGINGVPKIKNGYNPATWMLEVTSEAQEAALGVNFAEIYKNSDLYRRNKALIRELSTPPARSKDLYFTTQYSQSFITQCMACLWKQRLSYWRNPPYSAVRLLFTTVIAVLFGTIFWDLGSKWQRKQDLFNAMGSMYAAVLFIGVQNATSVQPVVAIERTVFYRERAAGMYSALPYAFGQVAVEIPYIFIQTLVYGVIVYAMIGFDWTGSKFFWYLFFMFFTFLYFTLFGMMLVGATPDHSVAAIVSFGFYLIWNLFSGFVIPRTRMPVWWRWFFWICPVSWTLYGLVTSQFGDIKERMESGEIVEEFVRSYFGYRDDFKAIAAVVVVAFSLIFGFTFAFSIKAFNFQKR 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00009 1441 Pfam ABC transporter 872 1024 IPR003439 GO:0005524
Sebi156g00009 1441 SMART AAA_5 881 1073 IPR003593 GO:0016887
Sebi156g00009 1441 SMART AAA_5 168 400 IPR003593 GO:0016887
Sebi156g00009 1441 Gene3D - 143 455 IPR027417 -
Sebi156g00009 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 868 1081 IPR027417 -
Sebi156g00009 1441 FunFam ABC transporter G family member 34 146 450 - -
Sebi156g00009 1441 Pfam ABC-2 type transporter 1169 1383 IPR013525 GO:0016020|GO:0140359
Sebi156g00009 1441 Pfam ABC-2 type transporter 495 707 IPR013525 GO:0016020|GO:0140359
Sebi156g00009 1441 CDD ABCG_PDR_domain2 841 1079 IPR034003 -
Sebi156g00009 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 143 416 IPR003439 GO:0005524
Sebi156g00009 1441 Pfam ABC-2 type transporter 374 427 IPR043926 GO:0140359
Sebi156g00009 1441 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 6 1441 - -
Sebi156g00009 1441 Gene3D - 862 1086 IPR027417 -
Sebi156g00009 1441 FunFam ABC transporter G family member 40 858 1088 - -
Sebi156g00009 1441 Pfam Plant PDR ABC transporter associated 712 775 IPR013581 -
Sebi156g00009 1441 Pfam ABC transporter 159 341 IPR003439 GO:0005524
Sebi156g00009 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 844 1096 IPR003439 GO:0005524
Sebi156g00009 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 416 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00009 Sebi-Chr156 164311 171341 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00009 880 1095 Calmodulin-binding Proteins AT2G36910 26.457 5.05e-06 49.3