Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi156g00008 ATGGAAGAAATTGAAGGATTGAATTGTTGTAGTGAAAGTAGGAGCTGCAGTGAGAGTCGACCACCCAATCCCAACCCATCTGCTGCTGCTGCATATCGCCAATGCCAACGCACTGACCCTGTGGTGATGCCATGCAAGATATCCCTTGTTCGCCACGCTTCTCTTCAGCCAAAAACGAAGTTGTCTGATGTATCTGCTGAGCCAGGGCATGCTGCTGAAGACTGTCAATCTGATTTCCTTCCAAAGCTTCGCTCTGGAGCATGTGGTGATATTGGGTTCAGGTCATGTATGGAAGATGTATATGTTTGTGCTGACAACTTTATGCAGGATTATGGGCTCAAGAACCATATAGATGGACCCAGTGCTTTCTATGGGGTAACATTATATGGCCAATGGTTTGGTCAGGTATTTGATGGGCATGGTGGAAAGCACGCTGCTGATTTTGCTTGCCATCATTTGCCAAAGTTCATTCTTGAGGATGAAGATTTCCCAGAAAATATTGAAAGGATAGTTGCTTCAGCATTTCTGCAAACAGACAAAGCCTTTGCAGAAGCTTGCTCTCTGGATGCTGCCCTTGCATCTGGCACCACTGCATTGGCTACTCTTGTTATTGGAAGGTTGCTGGTGGTGGCAAATGCCGGAGATTGTCGAGCTGTGCTGTGCCGTCGTGGAAAAGCAATTGAAATGTCAAGAGATCATAAACCAATTTGCAGTAAAGAAAAGAAGCGAATCGAGGCATCTGGGGGGTTTGTCTATGATGGATACCTCAATGGACAACTTAATGTTGCTCGTGCAATAGGTGACTGGCACATGGAAGGAATGAAAGGCGAAGATGGCGGACCACTCAGTGCAGAACCTGAACTTATGACTACAAAACTCACTGCTGAGGATGAATTTCTAATCATAGGTTGTGATGGAATTTGGGATGTATTTAGGAGCCAAAATGCAGTAGATTTTGCTCGGCGCAGGCTTCAGGAGCATAACGACCCAGCCATGTGTAGTAAAGATCTGGTTGATGAGGCATTAAAGAGAAAGAGTGGAGACAATTTAGCTGCTGTTGTGGTTTGCTTCCAGCAGCAGCCACCACCTAACTTGGTGGCACCGCGCTCTAGAGTGCACAGGAGCTTCTCTGCTGAAGGTTTGAAGGAGTTGCAAAGCTTCCTAGACAGCTTGGGTAATTGA 1182 0.4628 MEEIEGLNCCSESRSCSESRPPNPNPSAAAAYRQCQRTDPVVMPCKISLVRHASLQPKTKLSDVSAEPGHAAEDCQSDFLPKLRSGACGDIGFRSCMEDVYVCADNFMQDYGLKNHIDGPSAFYGVTLYGQWFGQVFDGHGGKHAADFACHHLPKFILEDEDFPENIERIVASAFLQTDKAFAEACSLDAALASGTTALATLVIGRLLVVANAGDCRAVLCRRGKAIEMSRDHKPICSKEKKRIEASGGFVYDGYLNGQLNVARAIGDWHMEGMKGEDGGPLSAEPELMTTKLTAEDEFLIIGCDGIWDVFRSQNAVDFARRRLQEHNDPAMCSKDLVDEALKRKSGDNLAAVVVCFQQQPPPNLVAPRSRVHRSFSAEGLKELQSFLDSLGN 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi156g00008 393 FunFam Probable protein phosphatase 2C 22 69 360 - -
Sebi156g00008 393 SMART PP2C_4 74 355 IPR001932 -
Sebi156g00008 393 Gene3D - 64 361 IPR036457 -
Sebi156g00008 393 Pfam Protein phosphatase 2C 92 349 IPR001932 -
Sebi156g00008 393 ProSiteProfiles PPM-type phosphatase domain profile. 84 357 IPR001932 -
Sebi156g00008 393 CDD PP2Cc 84 357 IPR001932 -
Sebi156g00008 393 MobiDBLite consensus disorder prediction 1 29 - -
Sebi156g00008 393 PANTHER PROTEIN PHOSPHATASE 2C 71 355 IPR015655 GO:0004722|GO:0006470
Sebi156g00008 393 MobiDBLite consensus disorder prediction 10 29 - -
Sebi156g00008 393 SUPERFAMILY PP2C-like 79 359 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi156g00008 Sebi-Chr156 159795 162427 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi156g00008 1 393 PP2C-type Phosphatase Gene Family AT2G25620 66.998 0.0 530
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi156g00008 K14803 - gmx:100815725 630.172