Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00147 ATGGGTAACTGCAGCAGCGAACCCTCTGCCAAAACCCAACCGAATTCGGACGCCACACCCTCCAATGGCATCTCCGATCGGAAACCCAACCCACCACCCTCCTCCGTGGGCCGCGTCCTGGGCCGACCCATGGAGGACGTTCGCTCCACCTACATCTTCGGCCGCGAACTAGGCCGCGGTCAGTTCGGAGTGACATACCTTGTGACTCACAAAGTCACCAAGGAGCAGTTTGCTTGCAAATCCATCGCCACGCGCAAGCTCGTTCACCGCGATGACTTGGAAGACATTAGCCGCGAGGTTCAGATCATGCACCACCTCACCGGTCATCTCAACATCGTTGAGCTCAAAGCTGCTTACGAGGATCGCCACTCCGTCAACCTCATCATGGAACTCTGCGCCGGCGGCGAGCTCTTCGACAGGATCATATCCAAGGGCCATTACTCCGAGCGTGCCGCAGCCAACTTGTGTCGCCAGATCGTCACTGTGGTCCACAATTGTCACACCATGGGAGTGATGCATAGGGATTTGAAGCCCGAGAATTTCTTGTTCCTTAGCAAGGACGAGAATTCGCCTCTTAAGGCCACGGATTTCGGTCTCTCCGTGTTTTTCAAGCCTGGAGATGTATTTAAAGATCTTGTTGGGAGTGCCTATTATGTTGCTCCTGAAGTGCTGCGTAGAAGTTATGGACCCGAAGCTGATATTTGGAGTGCCGGTGTTATACTATACATTCTGCTCTCTGGTGTCCCACCCTTCTGGGCAGAGAAAGAGCAGGGTATCTTTGATGCTATTCTTCGTGGACATATTGATTTCGCATCAGATCCTTGGCCTTCCATATCTAGTAGTGCCAAAGACCTGGTCAAGAAGATGCTACGAGCTGACCCTAAAGAACGGCTTTCGGCAGTTGAAGTCCTTGATCATCCCTGGATGAAAGAAGATGGAGCATCCGATAAGCCTCTTGATATTGCTGTTTTAACCAGAATGAAACAATTCAGGGCAATGAACAAGCTAAAGAAAGTAGCTCTGAAGGTTATTGCTGAGAATCTTTCTGAAGAAGAGATCATTGGCTTGAAGGAAATGTTCAAATCCATGGACACAGATAACAGTGGAACAATCACTTTTGAAGAGTTGAAAGCTGGTCTCCCCAAACTGGGTACTAAAATTTCCGAGTCTGAAGTAAGGCAGTTGATGGAAGCGAGTCCTCTCATATTGTTCACTGGCATGACAGGGTACATCACAATGGAAGAGTTGGAATCTGCCCTTAAAAAGTATAATATGGGTGATGAGAAAACAATAAAGGAGATCATTGCGGAAGTTGATACAGACAATGATGGAAGAATTAATTATGATGAGTTTGTAGCCATGATGAGGAAAGGCAACCCAGACTTGGTAACCAACAGACGTCGCAAATAA 1410 0.4837 MGNCSSEPSAKTQPNSDATPSNGISDRKPNPPPSSVGRVLGRPMEDVRSTYIFGRELGRGQFGVTYLVTHKVTKEQFACKSIATRKLVHRDDLEDISREVQIMHHLTGHLNIVELKAAYEDRHSVNLIMELCAGGELFDRIISKGHYSERAAANLCRQIVTVVHNCHTMGVMHRDLKPENFLFLSKDENSPLKATDFGLSVFFKPGDVFKDLVGSAYYVAPEVLRRSYGPEADIWSAGVILYILLSGVPPFWAEKEQGIFDAILRGHIDFASDPWPSISSSAKDLVKKMLRADPKERLSAVEVLDHPWMKEDGASDKPLDIAVLTRMKQFRAMNKLKKVALKVIAENLSEEEIIGLKEMFKSMDTDNSGTITFEELKAGLPKLGTKISESEVRQLMEASPLILFTGMTGYITMEELESALKKYNMGDEKTIKEIIAEVDTDNDGRINYDEFVAMMRKGNPDLVTNRRRK 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00147 469 Gene3D - 317 399 - -
Sebi155g00147 469 SUPERFAMILY EF-hand 347 456 IPR011992 -
Sebi155g00147 469 ProSitePatterns Serine/Threonine protein kinases active-site signature. 171 183 IPR008271 GO:0004672|GO:0006468
Sebi155g00147 469 Pfam Protein kinase domain 53 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00147 469 SMART serkin_6 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00147 469 Pfam EF hand 356 382 IPR002048 GO:0005509
Sebi155g00147 469 ProSiteProfiles EF-hand calcium-binding domain profile. 426 461 IPR002048 GO:0005509
Sebi155g00147 469 ProSiteProfiles Protein kinase domain profile. 51 309 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00147 469 MobiDBLite consensus disorder prediction 1 41 - -
Sebi155g00147 469 CDD STKc_CAMK 51 308 - -
Sebi155g00147 469 ProSitePatterns EF-hand calcium-binding domain. 439 451 IPR018247 -
Sebi155g00147 469 Gene3D Phosphorylase Kinase; domain 1 53 136 - -
Sebi155g00147 469 SMART efh_1 430 458 IPR002048 GO:0005509
Sebi155g00147 469 SMART efh_1 355 383 IPR002048 GO:0005509
Sebi155g00147 469 Gene3D - 406 469 - -
Sebi155g00147 469 MobiDBLite consensus disorder prediction 1 29 - -
Sebi155g00147 469 Pfam EF-hand domain pair 408 457 IPR002048 GO:0005509
Sebi155g00147 469 PANTHER SERINE/THREONINE-PROTEIN KINASE 48 451 - -
Sebi155g00147 469 CDD EFh 356 456 IPR002048 GO:0005509
Sebi155g00147 469 FunFam calcium-dependent protein kinase 1 137 316 - -
Sebi155g00147 469 ProSitePatterns Protein kinases ATP-binding region signature. 57 80 IPR017441 GO:0005524
Sebi155g00147 469 ProSitePatterns EF-hand calcium-binding domain. 364 376 IPR018247 -
Sebi155g00147 469 SUPERFAMILY Protein kinase-like (PK-like) 48 320 IPR011009 -
Sebi155g00147 469 Gene3D Transferase(Phosphotransferase) domain 1 137 316 - -
Sebi155g00147 469 ProSiteProfiles EF-hand calcium-binding domain profile. 351 386 IPR002048 GO:0005509
Sebi155g00147 469 FunFam Calcium-dependent protein kinase 1 53 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00147 Sebi-Chr155 1525999 1530070 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00147 37 468 EF-hand Containing Proteins AT4G23650 75.914 0.0 734
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Sebi155g00147 Pkinase 2.1e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00147 K13412 - gmx:100817321 823.542