Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00146 ATGGAACAGAAAGGCATTTTGATGTCAGCGTTGGGCGTTGGGGTGGGAGTGGGAGTGGGAATTGGCTGGGCTTCTAGACCAAGCGTTAGCAAATGGGGAGCTAATGCTTGTTCATCAAGCGCCATCACTCCGGAGAAGATGGAGCGAGAAATGCTACGATTAATTGTTGATGGCAGAGAAAGCAATGTCACTTTCGATCAATTCCCTTATTATCTCAGTGAGCAGACACGGGTGTTGCTAACAAGTGCTGCCTATGTCCACTTGAAGCATGCAGAGGTTTCTAGATATACACGGAATCTTGCTCCAGGAAGCCGGACTATTCTGCTGTCAGGGCCAGCAGAACTTTATCAACAGGTGCTTGCCAAGGCTTTAGCTCACTACTTTGAGGCGAAGTTGCTTCTGTTAGATTTTACTGACTTTTCATTGAAGATTCAGAATAAATATGGTTCTGCCAACAAAGAATCTTCTTTCAAAAGGTCTACTTCAGAGTCAACTTTGGAACGATTATCTGACCTATTTGGGTCATTTTCAATCTTCCCACAGAGGGAAGAGCATAAAGCTTATATAAACCATATCCCTGACCAGAAGCTTTTAGTTGCAGGCAAAATTCCCAGGCAAAGCAGTGGAGTGGACCTTCGATCAATGGAGGCTGACGGATCTTGTAACGCTCCTAAGCTTCGTAGGAATGCGTCTGCCTCTGCAAATATCAGTAGCCTTGGTTTGCAAAGCAACCCTACAAATTCAGCTCCTCTGAAGCACATAACCAGCTGGCCTTTTGATGAAAGGCTTGTTATACAAACTCTTTACAAGGTTCTAGTTTCAGTGTCAAAAACCTATCCCATTGTGCTATATCTGCGGGATGTTGATAAGCTGTTATATAGATCACAAAGGACACATATATTATTCAAGAAAATGTTGACGAAATTATCTGGACCAATTTTGATTCTTGGTTCACGAGTTCTGGATTCTGGTAATGACTGCAAAGAATTGAATGAGAGCCTTAATTCGCTCTTCCCCTACAATATTGAGATCAGGCCACCAGAAGATGAATCTCAACTTGTTAGCTGGAAGTCTCAATTTGAAGAGGATATGAAGAGGATACAGATCCAGGATAACAGGAACCATATCATGGAAGTGCTTGCAGCCAATGATCTTGATTGTGATGACCTGGATTGCATCTGTGTAGCAGACACAATGGTTCTCAGTTACTATATAGAAGAGATTGTCATGTCAGCAATTTCTTATCATTTGATGAATAACAAAGATCCTGAGTACAGAAATGGGAAACTGGTTATTCCATGCAATAGTTTGTCCCATGCATTGGGTATATTCCAGGATGGGAAATTCAGAGGAAGAGATACATTAAAATTAGAAGCTCAAGCAGTAACTTCTGAGAGAGAGGAAGGAGCTGTAACGAAACCAGAAGGAAAGCCTGACAATCCTGCTCCTGATACAAAGGCTGAAGCAGAAATACCAGCTTCAGTGGGAAAAGCTGACGGTGAAAATTCAGTTCCTGCATCCAAAGCTGAAGTTCCTCCCGATAATGAGTTTGAGAAGCGAATAAGACCTGAGGTAATACCAGCAAACGAGATTGGTGTAACATTCTCCGATATTGGTGCCTTAGATGATACCAAAGAATCACTTCAAGAACTAGTAATGCTTCCTCTTCGAAGGCCAGACCTTTTCAAAGGAGGCCTTCTAAAGCCTTGTAGAGGAATATTGCTATTTGGGCCTCCTGGCACCGGAAAGACAATGCTGGCAAAGGCCATTGCAAATGAGGCTGGAGCAAGTTTTATTAATGTGTCCATGTCTACCATAACCTCTAAATGGTTTGGTGAAGATGAGAAGAATGTTCGTGCTTTATTCACACTGGCAGCAAAGGTCTCCCCAACTATAATATTTGTTGATGAGGTTGATAGGCTACCATCTGTGGAGAACAGGGAAAAGATACTGAGGACTCTTTTGGCTAAAGAGGTGGTGGACCAGGAACTTGATTTTAAGGAACTCGCAACTGTGACAGAAGGATATAGCGGAAGTGATCTAAAGAACTTGTGCATAACTGCTGCTTATAGGCCTGTTCGAGAGTTAATTCAGCAAGAGAGACTAAAGAATTTGGAGAAAAAGCAGAAAGATGTTGAAGGACAGAATAATTTTGTCCAAGACGTACAAGGAGAACAATCTACGGCAGGAAATACCCAAGACGCCCAGGATGCAGAAGAGGAAGTTGAACAGGAAAGAGTTATTACCCTTAGGCCTTTGAATATGCAGGACTTCAAAGAGGCAAAGAATCAGGTTGCTGCAAGCTTCGCAGCTGAGGGTGCTGGAATGAATGAATTAAAGCAATGGAATGATTTGTATGGGGAAGGCGGTTCAGGAAGCGAGAGCAATTATCTTACTTCCTATAAGAATTACCAAAGGAAGAAAGACTTTTATAGCTGCACTCTGCTAGTTGGAACTTGTAAGTCTCTCGTTTTAAGAAATGAAAAGCGTGGAAATCATTTTCCACCAAAAAGACATCAAGCCGACAATCAAGAGTTAGTTGGTGATAATACATATGTATAA 2562 0.4212 MEQKGILMSALGVGVGVGVGIGWASRPSVSKWGANACSSSAITPEKMEREMLRLIVDGRESNVTFDQFPYYLSEQTRVLLTSAAYVHLKHAEVSRYTRNLAPGSRTILLSGPAELYQQVLAKALAHYFEAKLLLLDFTDFSLKIQNKYGSANKESSFKRSTSESTLERLSDLFGSFSIFPQREEHKAYINHIPDQKLLVAGKIPRQSSGVDLRSMEADGSCNAPKLRRNASASANISSLGLQSNPTNSAPLKHITSWPFDERLVIQTLYKVLVSVSKTYPIVLYLRDVDKLLYRSQRTHILFKKMLTKLSGPILILGSRVLDSGNDCKELNESLNSLFPYNIEIRPPEDESQLVSWKSQFEEDMKRIQIQDNRNHIMEVLAANDLDCDDLDCICVADTMVLSYYIEEIVMSAISYHLMNNKDPEYRNGKLVIPCNSLSHALGIFQDGKFRGRDTLKLEAQAVTSEREEGAVTKPEGKPDNPAPDTKAEAEIPASVGKADGENSVPASKAEVPPDNEFEKRIRPEVIPANEIGVTFSDIGALDDTKESLQELVMLPLRRPDLFKGGLLKPCRGILLFGPPGTGKTMLAKAIANEAGASFINVSMSTITSKWFGEDEKNVRALFTLAAKVSPTIIFVDEVDRLPSVENREKILRTLLAKEVVDQELDFKELATVTEGYSGSDLKNLCITAAYRPVRELIQQERLKNLEKKQKDVEGQNNFVQDVQGEQSTAGNTQDAQDAEEEVEQERVITLRPLNMQDFKEAKNQVAASFAAEGAGMNELKQWNDLYGEGGSGSESNYLTSYKNYQRKKDFYSCTLLVGTCKSLVLRNEKRGNHFPPKRHQADNQELVGDNTYV 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00146 853 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 45 640 - -
Sebi155g00146 853 SMART AAA_5 569 851 IPR003593 GO:0016887
Sebi155g00146 853 Pfam ATPase family associated with various cellular activities (AAA) 573 656 IPR003959 GO:0005524|GO:0016887
Sebi155g00146 853 Gene3D - 532 641 IPR027417 -
Sebi155g00146 853 MobiDBLite consensus disorder prediction 830 844 - -
Sebi155g00146 853 Coils Coil 702 722 - -
Sebi155g00146 853 MobiDBLite consensus disorder prediction 830 853 - -
Sebi155g00146 853 Gene3D - 643 766 - -
Sebi155g00146 853 MobiDBLite consensus disorder prediction 462 516 - -
Sebi155g00146 853 MobiDBLite consensus disorder prediction 462 484 - -
Sebi155g00146 853 Pfam AAA+ lid domain 664 706 IPR041569 -
Sebi155g00146 853 MobiDBLite consensus disorder prediction 724 743 - -
Sebi155g00146 853 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 533 709 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00146 Sebi-Chr155 1509386 1515608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00146 533 648 Calmodulin-binding Proteins AT3G56690 43.966 2.48e-23 104