Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Sebi155g00136 | ATGGCGAGGGAGCTGGAAAAGAAAGCCAAAGAAGCATTCATCGACGACGACTTTGCTCTCGCCGTTGATCTCTACACTCAGGCCATCCACTTGGATCCTAACAACGCTAACCTCTTCGCCGATAGAGCCCAAGCCCATATTAAGCTCAACGCTTTCACCGAAGCGGTTTCTGATGCTAACAAAGCTATCCAACTAAACCCTTCATTATCAAAGGCCTATCTTCGTAAAGGGACCGCTTGTATAAAGCTCGAAGAATATCATACTGCCAAGGTAGCACTGCAAAACGGCGCCTCTTTTGCTCAAGATGATTCAAGATTCACCAATTTGATTCAGGAATGTGATCGCTATATTGCAGAGGAATCAAATGGTCTCACTAGCACCTTATCACCAAATGGGCCCAAAACAACTGCACCATCTGGTGATAATCCCCATTCAAGTTATGGAAGTGATGGAACGACTAAAGAAGCTGAAAGAGATTTGGTATCACGAATCAATGAAGTTGCATTAATCAGACCAAAATATAGACATGAATACTACCAGAAGCCAGAAGAAGTGGTTGTGACAATATTTGCAAAAGGAATACCAGAGAAAAATGTGGTCGTTGACTTTGGTGAACAAATTCTGAGTATTACTATTGATGTTCCTGGTCAAGACGCCTATCATTATCAACCTCGATTGTTTGGAAAGATAATACCTGATAAGTGCAGAGTTGTGGTGCTGTCAACCAAAATTGAAATACGTCTTGCAAAAGCTGAAGCTATTAATTGGAGATCTCTGGAATATGGCAAGGATATTCTTCCCCAAAAAATAAAAATGCCAACAATTCAATCTGAAAGGCCTGCTTACCCATCATCAAAGACAAGGACAAGAGATTGGGATAAGTTGGAAGCTCAAGTAAAAAAAGAGGAGAAAGAAGAAAAGCTCGATGGTGATGCTGCTTTGAATAAATTGTTCCGTGATATTTACAAAAATGCAGATGAGGACATGCGAAGAGCCATGAGCAAGTCTTTTCTGGAGTCAAATGGAACTGTGCTGTCAACTGATTGGAAAGAAGTGGGATCAAAGAAGGTAGAAGGCAGTCCTCCGGAAGGAATGGAGTTGAAGAAATGGGAGTATTGA | 1119 | 0.4147 | MARELEKKAKEAFIDDDFALAVDLYTQAIHLDPNNANLFADRAQAHIKLNAFTEAVSDANKAIQLNPSLSKAYLRKGTACIKLEEYHTAKVALQNGASFAQDDSRFTNLIQECDRYIAEESNGLTSTLSPNGPKTTAPSGDNPHSSYGSDGTTKEAERDLVSRINEVALIRPKYRHEYYQKPEEVVVTIFAKGIPEKNVVVDFGEQILSITIDVPGQDAYHYQPRLFGKIIPDKCRVVVLSTKIEIRLAKAEAINWRSLEYGKDILPQKIKMPTIQSERPAYPSSKTRTRDWDKLEAQVKKEEKEEKLDGDAALNKLFRDIYKNADEDMRRAMSKSFLESNGTVLSTDWKEVGSKKVEGSPPEGMELKKWEY | 372 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Sebi155g00136 | 372 | MobiDBLite | consensus disorder prediction | 123 | 150 | - | - | |
| Sebi155g00136 | 372 | Gene3D | Tetratricopeptide repeat domain | 1 | 122 | IPR011990 | GO:0005515 | |
| Sebi155g00136 | 372 | SUPERFAMILY | TPR-like | 2 | 113 | IPR011990 | GO:0005515 | |
| Sebi155g00136 | 372 | SUPERFAMILY | HSP20-like chaperones | 172 | 266 | IPR008978 | - | |
| Sebi155g00136 | 372 | PANTHER | PROTEIN SGT1 HOMOLOG | 1 | 370 | IPR044563 | GO:0051087 | |
| Sebi155g00136 | 372 | Pfam | Tetratricopeptide repeat | 15 | 56 | - | - | |
| Sebi155g00136 | 372 | ProSiteProfiles | CS domain profile. | 171 | 260 | IPR007052 | - | |
| Sebi155g00136 | 372 | FunFam | Protein SGT1 homolog A | 169 | 273 | - | - | |
| Sebi155g00136 | 372 | MobiDBLite | consensus disorder prediction | 123 | 156 | - | - | |
| Sebi155g00136 | 372 | CDD | p23_CS_SGT1_like | 177 | 260 | - | - | |
| Sebi155g00136 | 372 | Gene3D | - | 172 | 263 | IPR008978 | - | |
| Sebi155g00136 | 372 | SMART | tpr_5 | 2 | 35 | IPR019734 | GO:0005515 | |
| Sebi155g00136 | 372 | SMART | tpr_5 | 36 | 69 | IPR019734 | GO:0005515 | |
| Sebi155g00136 | 372 | SMART | tpr_5 | 70 | 103 | IPR019734 | GO:0005515 | |
| Sebi155g00136 | 372 | ProSiteProfiles | TPR repeat profile. | 36 | 69 | IPR019734 | GO:0005515 | |
| Sebi155g00136 | 372 | MobiDBLite | consensus disorder prediction | 352 | 372 | - | - | |
| Sebi155g00136 | 372 | Pfam | SGS domain | 290 | 370 | IPR007699 | - | |
| Sebi155g00136 | 372 | FunFam | Protein SGT1 homolog | 1 | 127 | - | - | |
| Sebi155g00136 | 372 | ProSiteProfiles | SGS domain profile. | 281 | 372 | IPR007699 | - | |
| Sebi155g00136 | 372 | Pfam | CS domain | 175 | 250 | IPR007052 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Sebi155g00136 | 1 | 112 | U-box Gene Family | AT3G07370 | 29.464 | 3.88e-09 | 55.5 |