Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00130 ATGGGTCACCATTCTTGCTGCAACCAACAGAAGGTTAAGAGAGGGCTTTGGTCTCCTGAGGAAGATGAGAAGCTCATCCGATACATTACCACTCATGGCTATGGCTGCTGGAGTGAAGTTCCAGAGAAAGCTGGGCTTCAACGGTGTGGTAAGAGCTGCCGCCTGAGATGGATTAATTATTTGAGGCCTGATATTCGAAGAGGCAGGTTTACACCTGACGAGGAGAAGTTAATTATTAGCCTTCATGGGGTTGTTGGCAACAGATGGGCTCACATTGCAAGCCACTTGCCTGGAAGAACTGACAATGAAATAAAGAACTATTGGAATTCTTGGATCAAAAAGAAAATACGAAAATCTTCTTCAGTGCCTTCATCCATCACTACCACCACAACACATCAAAGCATTGATCATCCCCAGTTCAATTATAATTCCAATCAACTAGATCACTTCGCCAACCAAGAAAACACCATAACAGCAAAGCCAACGATACAAGAACCCTTATTTTCTTCCACATGCCCTTTATTTATGTTTGACACTAGTTCATTAGATGGAACAATAACATCAGCAGATCACACCAATAGCAATAACGCACGAGCATCAGATCAATTATTCCAAGATACAAGTACTGTGGGTTTGAGTTGTGCAGAAACGTGGAACTTGAGCATCCACCAACAAGTCCAGGCCCTTCCTCCTCATCCAGTAACAACTTTTTCAGCAGCTGCAGTCATTGATTCTACTAATTATCTGCCACCATTGATAGAGAACATGGTGCCAATTGATGTACAATCTTGCAACATGGAGGAAGAAGGAGAACTAACACTAGAGTGCTTGCAGAGACAAGGGTTGAATGAGTGGGTGGAGAGCCAACAACAATGTCCTAGCTTTCTTTTTTGGGACAGTGTAGTGGAAGGACAACTTGGAGGAGGGGGAGAATTAGCACCAAACTCATCAAATATGGGAACAAATACACTTTCTCCTTTTCCTTCATCTTTATGA 996 0.4277 MGHHSCCNQQKVKRGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYLRPDIRRGRFTPDEEKLIISLHGVVGNRWAHIASHLPGRTDNEIKNYWNSWIKKKIRKSSSVPSSITTTTTHQSIDHPQFNYNSNQLDHFANQENTITAKPTIQEPLFSSTCPLFMFDTSSLDGTITSADHTNSNNARASDQLFQDTSTVGLSCAETWNLSIHQQVQALPPHPVTTFSAAAVIDSTNYLPPLIENMVPIDVQSCNMEEEGELTLECLQRQGLNEWVESQQQCPSFLFWDSVVEGQLGGGGELAPNSSNMGTNTLSPFPSSL 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00130 331 Gene3D - 6 66 - -
Sebi155g00130 331 CDD SANT 69 112 IPR001005 -
Sebi155g00130 331 Gene3D - 68 139 - -
Sebi155g00130 331 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Sebi155g00130 331 FunFam MYB transcription factor 6 66 - -
Sebi155g00130 331 SMART sant 66 114 IPR001005 -
Sebi155g00130 331 SMART sant 13 63 IPR001005 -
Sebi155g00130 331 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Sebi155g00130 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Sebi155g00130 331 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Sebi155g00130 331 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Sebi155g00130 331 CDD SANT 17 61 IPR001005 -
Sebi155g00130 331 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Sebi155g00130 331 MobiDBLite consensus disorder prediction 311 331 - -
Sebi155g00130 331 MobiDBLite consensus disorder prediction 308 331 - -
Sebi155g00130 331 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Sebi155g00130 331 PANTHER MYB DOMAIN PROTEIN 55 1 235 - -
Sebi155g00130 331 FunFam Transcription factor MYB26 68 140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00130 Sebi-Chr155 1319245 1320990 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00130 1 304 MYB Transcription Factor Family AT1G63910 52.113 9.42e-102 302
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi155g00130 Myb_DNA-binding 5.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00130 K09422 K02947 gmx:100803556 494.197