Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00128 ATGGGTAGCAAAAGCAAAGAGAAAGAGGAAAATCAAATAAAGAGGGTTTTGACTCACGGAGGAAGATACGTGCAATACAATGTGTACGGAACCTTGTTTGAGGTCTCTTCCAAATATGTTCCTCCCATTCGCCCTATCGGTAGAGGCGCTTATGGCTTTGTCTGTTCTGCTGTTAATTCAGATACGCACGAAGAAGTTGCCATCAAGAAGATTGGTAACGCATTTGACAACATTATTGATGCTAAAAGGACTCTTAGGGAAATTAAACTGCTTCGCCACTTGGACCATGAAAATATTATTGCTATTAAAGATATAATACGACCTCCCAGAAAGGATGCCTTTAATGATGTTTACATTGTTTATGAATTGATGGACACTGATCTTCATCAGATAATTCGTTCTGACCAGCCTCTCAATGATGACCATTGTCAGTACTTTTTATACCAGCTGTTACGGGGGTTAAAATATGTGCATTCAGCTAATATCTTGCACCGTGATCTTAAGCCCAGCAATTTACTTCTGAATGGCAATTGCGACCTTAAAATTGGGGACTTTGGTTTGGCAAGGACGACATCTGAAACGGATTTCATGACGGAGTATGTTGTCACCCGATGGTACCGAGCCCCTGAATTGCTCCTTAATTGTTCAGAGTACACCTCTGCAATTGATGTTTGGTCTGTTGGTTGCATATTTGGTGAAATTATGACCAGAGAACCCTTGTTTCCTGGGAAAGATTATGTTCATCAGCTAAGGCTTATAACAGAGTTAATAGGTTCACCTGATGACGCCAGCCTAGGATTTCTCCGAAGTGAAAATGCCCGAAGATATGTTAGACAGATTCCACAATACAGGAAGCAAAAATTCTCAGCAAGATTCCCTAATATGTCGCCTGAGGCTCTGGATCTACTAGAAAAGATGCTTATCTTTGATCCCAACAAACGTATTACAGTTGATGAGGCCCTATGTCACCCATATCTTTCATCTCTTCATGACATCAATGATGAGCCAGTTGGTCCCAGGCCATTCAGTTTTGATTTTGAGCAGCCAACATGCACTGAAGAGCACATCAAGGAGCTCATCTGGAGGGAATCAGTGAAGTTCAATCCAGATCCTCCCTGTCAGTGA 1125 0.4169 MGSKSKEKEENQIKRVLTHGGRYVQYNVYGTLFEVSSKYVPPIRPIGRGAYGFVCSAVNSDTHEEVAIKKIGNAFDNIIDAKRTLREIKLLRHLDHENIIAIKDIIRPPRKDAFNDVYIVYELMDTDLHQIIRSDQPLNDDHCQYFLYQLLRGLKYVHSANILHRDLKPSNLLLNGNCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTSAIDVWSVGCIFGEIMTREPLFPGKDYVHQLRLITELIGSPDDASLGFLRSENARRYVRQIPQYRKQKFSARFPNMSPEALDLLEKMLIFDPNKRITVDEALCHPYLSSLHDINDEPVGPRPFSFDFEQPTCTEEHIKELIWRESVKFNPDPPCQ 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00128 374 FunFam Mitogen-activated protein kinase 124 353 - -
Sebi155g00128 374 Pfam Protein kinase domain 44 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00128 374 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 38 327 - -
Sebi155g00128 374 FunFam Mitogen-activated protein kinase 25 134 - -
Sebi155g00128 374 Gene3D Transferase(Phosphotransferase) domain 1 124 353 - -
Sebi155g00128 374 Gene3D Phosphorylase Kinase; domain 1 23 363 - -
Sebi155g00128 374 ProSiteProfiles Protein kinase domain profile. 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00128 374 SUPERFAMILY Protein kinase-like (PK-like) 43 334 IPR011009 -
Sebi155g00128 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 162 174 IPR008271 GO:0004672|GO:0006468
Sebi155g00128 374 ProSitePatterns Protein kinases ATP-binding region signature. 46 70 IPR017441 GO:0005524
Sebi155g00128 374 SMART serkin_6 40 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00128 374 CDD STKc_TEY_MAPK 33 369 - -
Sebi155g00128 374 ProSitePatterns MAP kinase signature. 75 178 IPR003527 GO:0004707|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00128 Sebi-Chr155 1302114 1304619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00128 9 369 MAP Kinase Gene Family AT4G01370 83.380 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Sebi155g00128 Pkinase 1.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00128 - - gmx:100803024 720.309