Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00123 ATGCAGACTCATCTATCGAACCAGATCCAAGGCTTTGTGTCGACGGAGGCAGAGATGTTCAACCTCAGCGGCACAGGCATGGAAATGATAGGGTTTCCCAAGCAACAACAGAGTGAATGGAAAAGCTTCTTCTCCAAACCTGGTCCGACTTCTTCCAGCACCATGAACGAGTCTTGTAGTAATTTCTTCCAGCATCAGCATGAATACACAAACACAACTGCAGGGATTTCTGAAACAGGTAGCCAGAATCTGATTGTTGGTGATTCCTCAGCAGCATGGCAGGGAGAGAACAGATCATTGGTGGTGGAAGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGAAATGAAAGGCCAAGTCAAGGCCTTTCACTCTCTCTCAGTTCAAACAATCCTTCCAGTATTGGGTTGCAATCTTTTGAGCTAAGACATCATCAACCCCAATCTGATTTCGTCTCAGATGGGAAATCATCATCAGGGAATGCTCAACAACAACAGATGACGTTGGAAGATGTGTATTTGAGTGCCAAAGCTGCTGCAAATCTTTATCATTCAGGACATTTCTTGCTCACGAACTCCAAGTACTTGGTACCTGCACAGGAACTTTTGAACGAGTTTTGTAGTCTAGACGCAAGGCAAAGTGATGATGTGGCAAAGCAAAAGTTGGAGAAGAACAAGGCGCAGTTGGAAATAGATCAGGATACCTCAAAGAAGCATTCTCTCACCTCTCTAGAGTTGGCTGAATTGCACAAGAGAAAGATAAAGCTGCTTTCCATGCTGGAAGAGGTTGAGAGAAGATATAGGCACTACCGTAATCAGATGAAGGCGGTGGTGTCTTCATTTGAAGCAGTGGCTGGGAATGGGGCTGCGACGGTGTACTCAGCGTTGGCCTTGAAAGCCATGTCGAGACATTTCAGGTGTTTGAAGGATGGGATTATGGGACAGATTGAGGTGACAAGGAAAGGCATGGGAGAGAGAGATGCTGCAGTTGGAACAAGCAGCAGGGGGGAAACGCCGAGGCTGAAAATAATAGACCAAGCACTGAGACAACAAAGGGCGTTTCAGCAAATGAACATGACGGAAACCCATCCATGGAGACCCCAGCGTGGCCTTCCCGACCGTTCTGTCTCCATTCTAAGGGCTTGGCTTTTTGACCATTTTCTCAATCCGGTGAGGCTATGGAAGCCAATGGTGGAGGATATGTACTTGGAGGAAGTGAAGGAACAAGAAAACAATATTAATTGTGAGGATGATCAGAAGCCAACAGTTGGATTAAATAATATTGATTCCGAGTGTGCATCCATCAACAACCAACAACATATCAATGCTTTTTCATCATCTAACACAAGTAGTGGGGGTGGAGTGTCTTTGACGCTGGGGTTAAAACAAGCGCCACCAAGTCAGAGTTCAGTGTTGTATCCAATTGTAAGGGAACCAGGTGTTGTTCAGTACTCTCTTTTCGATGAGGAAGGACTTAACCCGCTGCAGCCATACAGGAATTTGATGGACGCACAGCTGCTCCATCACCTCCCGGGTTAG 1539 0.4607 MQTHLSNQIQGFVSTEAEMFNLSGTGMEMIGFPKQQQSEWKSFFSKPGPTSSSTMNESCSNFFQHQHEYTNTTAGISETGSQNLIVGDSSAAWQGENRSLVVEDSSLRCVFPCEGNERPSQGLSLSLSSNNPSSIGLQSFELRHHQPQSDFVSDGKSSSGNAQQQQMTLEDVYLSAKAAANLYHSGHFLLTNSKYLVPAQELLNEFCSLDARQSDDVAKQKLEKNKAQLEIDQDTSKKHSLTSLELAELHKRKIKLLSMLEEVERRYRHYRNQMKAVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGIMGQIEVTRKGMGERDAAVGTSSRGETPRLKIIDQALRQQRAFQQMNMTETHPWRPQRGLPDRSVSILRAWLFDHFLNPVRLWKPMVEDMYLEEVKEQENNINCEDDQKPTVGLNNIDSECASINNQQHINAFSSSNTSSGGGVSLTLGLKQAPPSQSSVLYPIVREPGVVQYSLFDEEGLNPLQPYRNLMDAQLLHHLPG 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00123 512 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 128 390 - -
Sebi155g00123 512 SMART prehox3 184 314 IPR006563 -
Sebi155g00123 512 Coils Coil 246 280 - -
Sebi155g00123 512 Pfam Associated with HOX 190 312 IPR006563 -
Sebi155g00123 512 Coils Coil 219 239 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00123 Sebi-Chr155 1255086 1257323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00123 95 510 Homeobox Transcription Factor Family AT5G41410 40.189 1.18e-87 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00123 - - gmx:100787954 556.214