Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00121 ATGCAAAAAAAAACCCTTACTCTGGAGATGGTCCTTTGTGATGAAAGGGGTGGCGAAATTCACACAGTTGTTAGAAGAACTCTGGTGTACAAATTTCAATCCACCCTAATTGAGGGAGCTGCTTATACCATATCTAATTTTGGTGTTGGTGAAAATTCTGGTGAGTTCAAGTATTCTATGCATTTGTACAAGGTGAACTTCGAGTACCATACAAAAGTTGTTTTGATGAGAGACTGCACTATTCCCCGATTTCAATTTTCATTTGTGTCTTTGGCGGACATAATGGCACCATCTTTTGACAACAACTATTTAGTTGATGTAATGGGAGTGTTGACTGGTATTGGTACTGAGAAGGAGTATGAGAGGAATCGCATGAATGTGATGGAACTGGAAATAGATGGGTCCAAAATAGAATGTGCTCTGTTCGAAAATTACCTTGATGATTTGAATGCATTCCTTGCTTGTGTCATTGATCCAAATGCTTTTCTGTTATCCTCATTGTCAGGGAAAGTATCTCTGCAAAATGCTCTCCATGCTACTAAGTTGATTTTCAACCCTGACTTCGATAAAGCTGTGAAATTAAGGAAAAGGCTTGAAGAAAACACTAATTCTGTTTCCCAACCTTTAAGTCAAATTGCTGAAGCTCCAAAGATGTCTATTGAGGAGGAGTTCTTGACTCATACTATAATGAAGACTATTGAGGAGCTAAAGGACTCTAATGAGGAATGTTGTTGTATTGTCATGGCTACGATCAAGCATCTTATTGATGGAGAAGACTGGTGGTATAAGGCTTGCAGATGTGGCACGTACCGTCTGAAGGTTCGTGTTATTGATGCAACTGATTCTGCAACATTTGTAATTTTTTATCGAGACGTTGCATCTCTTCTGGATATAAGTTGTTCTGATTTGTTGGAGTTTACTGTCCAGCCCAATGATAAGAATTTTCTTGCTGAAATCTCTGCATTGGTTGATAAAACTTTTCTGTTCAAAGTTGAGAATAAGATTGTCTCCAATTCTAGGTTTGAGACATCTTACAAAACTGATGACTCTTTAGACTATGTCATACCTGATGGGCAGCTATTGCTTGGTGTTGTTTTATCCAATGATCTGCCAAAAGAGGTGGATTTGATGATCCAATTTTCTGATTCAGTCAATGATGATAAAAATAATCCTGTCTTATTGGGAACTGCTGATGGAGAAGGACTGATAATGGATTCTGATTGTATTACTCCATGTAAAAGAAATTCTGCTGATTGTACTGATGATCCCATTGTTGTTGCATCCTCTATCAAGTTGAAGAAAGTTATCAAACAAGAAAAGACTGATATTTTCGCTGGCTGA 1341 0.3773 MQKKTLTLEMVLCDERGGEIHTVVRRTLVYKFQSTLIEGAAYTISNFGVGENSGEFKYSMHLYKVNFEYHTKVVLMRDCTIPRFQFSFVSLADIMAPSFDNNYLVDVMGVLTGIGTEKEYERNRMNVMELEIDGSKIECALFENYLDDLNAFLACVIDPNAFLLSSLSGKVSLQNALHATKLIFNPDFDKAVKLRKRLEENTNSVSQPLSQIAEAPKMSIEEEFLTHTIMKTIEELKDSNEECCCIVMATIKHLIDGEDWWYKACRCGTYRLKVRVIDATDSATFVIFYRDVASLLDISCSDLLEFTVQPNDKNFLAEISALVDKTFLFKVENKIVSNSRFETSYKTDDSLDYVIPDGQLLLGVVLSNDLPKEVDLMIQFSDSVNDDKNNPVLLGTADGEGLIMDSDCITPCKRNSADCTDDPIVVASSIKLKKVIKQEKTDIFAG 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00121 446 SUPERFAMILY Nucleic acid-binding proteins 231 331 IPR012340 -
Sebi155g00121 446 Gene3D - 2 78 IPR012340 -
Sebi155g00121 446 Pfam Domain of unknown function DUF223 9 104 IPR003871 -
Sebi155g00121 446 SUPERFAMILY Nucleic acid-binding proteins 5 78 IPR012340 -
Sebi155g00121 446 Gene3D - 268 354 IPR012340 -
Sebi155g00121 446 SUPERFAMILY Nucleic acid-binding proteins 85 202 IPR012340 -
Sebi155g00121 446 Gene3D - 80 207 IPR012340 -
Sebi155g00121 446 CDD RPA1_DBD_A_like 6 73 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00121 Sebi-Chr155 1225236 1227678 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00121 12 365 Core DNA Replication Machinery Family AT4G19130 23.114 6.68e-14 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00121 - - vun:114180582 288.115