Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Sebi155g00104 | ATGGGTAGCAAGTTTGAGGGTTGGAACTGCATAAATGGGTTGCAGTGCTGTGGGAACCTGTCGCCTCAACCACACTATCCATCGATGACAAGTTACCCGAGAGGCACTTCACCAGAATTAGCAAAGAAATTAGTGATGGAAGGTTCAGAGGCTAAAGTTGTTTTCTGCGTTACGGGAATGACGTGTGCTGCCTGTGCTGGATCCGTTGAGAAATCCATCAAACGGTTACCTGGGATTCATGAGGCCGTCGTTGATGTCTTGAATGATAAAGCCCAAGTTCTATACTACCCCTCCTTGGTTAACGAGGAGAGGATCCGTGAGGCCATTGAAGATGCTGGATTTGAAGCGAAAGCCATGGAAGAAGATTCCAATGACACGTCATCTCAAATATGTCGAATACACATAGGGGGCATGACATGTACTTCTTGCTCCTCCACCGTCGAATCAGTTCTGCAAAGACTTCGTGGGGTCCACAAAGCACGAGTGGCCTTGGCCACCGAAGAAGCAGAAGTCCGTTACGACCCTAAGATTGTCAGTTACAATCAGTTAATGGAAGCTATAGAAGAGGCTGGGTTTGAAGCCGTACTAATAAGCAAAGGGGAACACATAAGCAAGATAGAGCTTAAAGTTGATGGCATTAAAAACGAGCAATCCATGAGTGCCATTGAAAAATCTCTCCAGGAACTCCCTGGTGTTGAAACCATAGAAATTTATCCTGACATTCACAAAGTTGTCGTCACTTATAAGCCATATATGACAGGGCCTAGAACCTTCATCCAAGTCATAGAATCTTCTGGATCTGGTTGTTTTAGAGCGGTTATATTTCCCAATGATGGAGGAAGAGAAGCACATAAACAGGGCGAAATTGACCGATACTTCAAATTATTCAAGTGGAGTTTGGCTTTCACCATTCCTGTTTTTCTAACATCCATGGTCCTTATGTATATACCTGGAATTAAACATGTTTTAGATATCAAAGTTGTTAATATGTTGAACATTGGACTGCTCTTGAGGTTGGAATTTGCTACTCCAGTACAGTTTATCATTGGCAGGAGATTCTACATTGGGTCCTATAAAGCTCTACGCAAAGGTTCTGCTAACATGGATGTTTTGATAGCCTTGGGAACAAATGCAGCATATTTCTATTCTGTCTATATTGCTGGAAGAGCTGCTTTTTCAAGGCATTTCAAAGGCCATGATTTTTTTGAGACCAGTTCTATGCTTATTTCATTTATTTTACTTGGAAAGTATTTGGAAGTGTTGGCAAAGGGTAAGACATCACAGGCAATTGCTAAGCTTATGGACTTGACCCCTGATACAGCTACCTTATTAACTCAAGATGATGAAGGAAATGTCATTAGTGAACAACAAATTGATAGCCGGTTGATACAAAAGAATGATGTGATCAAAATTGTTCCGGGTGCAAAAGTAGCATCAGATGGTTTTGTTATTTGGGGACAAAGTCACATAAATGAAAGCATGATAACTGGTGAAGCAAGGCCTGTGGCGAAGAGGAAGGGTGATATGGTGATTGGAGGCACTGTGAATGAGAATGGGGTTTGGCATGTTAAGGTAACAAGGGTTGGATCAGAGAGTGCCCTTTCCCAGATTGTTCGACTTGTTGAGTCTGCCCAAATGGCTAAAGCTCCTGTCCAGAAACTTGCAGACCAAATTTCTAAATATTTTGTTCCACTAGTCATTGTGCTTTCTCTTTCAACATTTCTTTCTTGGTTTGTAGCTGGAAAGTTACATGCATTCCCAAAATCTTGGATACCATCCTCCATGAATAGCTTTGAGCTTGCACTTCAGTTTGGAATTTCACTGATGGTCATAGCCTGCCCTTGTGCTCTTGGCCTAGCCACTCCTACAGCTGTCATGGTTGGTACTGGTGTTGGTGCAACTCAAGGTGTGTTGATCAAAGGGGGGCAAGCATTAGAAAGTGCACACAAGGTGAATTGTATAGTGTTTGATAAGACAGGGACTCTCACAGTTGGGAAGCCTGTGGTTGTGACTACAAAACTCTTAAAAAATATGTCACTTAAAGATTTCTATGAATTTGCTGCTGCAGCAGAGGTGAATAGTGAACATCCAATAGCCAAGGCCATTGTTGAGTATGCCAAGAATATCATAGAAGATGAACAGAATCATCCCTTGCCAGAAGCAAAGGACTTTGTTTCTGTTTCAGGACATGGAGTCAAGGCAATTGTTCGAAACAAGGAAATAATGATTGGGAATAAAAAATTGATGCTGGATCACAACATAGCCATTTCAGTGGATGCTGAAGAAATACTAGCAGAAGCTGAAAGCCTGGCTCAAACAGGGATTTTGGTATCCCTAGATGGAGAAGTGGCAGGAATTTTGGCTGTATCTGACCCATTGAAACCTAATGCCAAAGAAATTATTTCTATTCTTAACTCCATGAAAATCAGGAGCATCATGGTGACAGGTGATAACTGGGGAACAGCCAATTCCATAGCCAGACAAGCTGGCATTGAAACTGTAATGGCAGAGGCTCAACCTGAGACTAAAGCTACTAAAGTAAAAGAATTGCAGACTATGGGGTACATTGTGGCAATGGTGGGAGATGGCATCAATGACTCACCAGCACTGGTGGCAGCTGATGTTGGAATGGCAATTGGTGCTGGGACAGACATAGCTATTGAGGCAGCTGACATTGTTCTCATGAAGAGCAACTTGGAGGATATAATAACTGCCATTGACCTTGCAAAGAAAACTTTCTCCCGTATACGTCTAAACTACGTTTGGGCTTTGGGTTACAATCTTCTAGCCATCCCAATTGCTGCGGGCGTCCTTTACCCTTCCACTAAATTTCGACTACCACCATGGATTGCTGGAGCTGCAATGGCTGCCTCTTCTGTTAGTGTTGTTTGCTCCTCCCTCTTGTTAAAGTATTACAAGAGACCAAAGAAGCTAAACAACTTGGAGATAAACGGTATAAAGATTGAATAA | 2970 | 0.4239 | MGSKFEGWNCINGLQCCGNLSPQPHYPSMTSYPRGTSPELAKKLVMEGSEAKVVFCVTGMTCAACAGSVEKSIKRLPGIHEAVVDVLNDKAQVLYYPSLVNEERIREAIEDAGFEAKAMEEDSNDTSSQICRIHIGGMTCTSCSSTVESVLQRLRGVHKARVALATEEAEVRYDPKIVSYNQLMEAIEEAGFEAVLISKGEHISKIELKVDGIKNEQSMSAIEKSLQELPGVETIEIYPDIHKVVVTYKPYMTGPRTFIQVIESSGSGCFRAVIFPNDGGREAHKQGEIDRYFKLFKWSLAFTIPVFLTSMVLMYIPGIKHVLDIKVVNMLNIGLLLRLEFATPVQFIIGRRFYIGSYKALRKGSANMDVLIALGTNAAYFYSVYIAGRAAFSRHFKGHDFFETSSMLISFILLGKYLEVLAKGKTSQAIAKLMDLTPDTATLLTQDDEGNVISEQQIDSRLIQKNDVIKIVPGAKVASDGFVIWGQSHINESMITGEARPVAKRKGDMVIGGTVNENGVWHVKVTRVGSESALSQIVRLVESAQMAKAPVQKLADQISKYFVPLVIVLSLSTFLSWFVAGKLHAFPKSWIPSSMNSFELALQFGISLMVIACPCALGLATPTAVMVGTGVGATQGVLIKGGQALESAHKVNCIVFDKTGTLTVGKPVVVTTKLLKNMSLKDFYEFAAAAEVNSEHPIAKAIVEYAKNIIEDEQNHPLPEAKDFVSVSGHGVKAIVRNKEIMIGNKKLMLDHNIAISVDAEEILAEAESLAQTGILVSLDGEVAGILAVSDPLKPNAKEIISILNSMKIRSIMVTGDNWGTANSIARQAGIETVMAEAQPETKATKVKELQTMGYIVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSNLEDIITAIDLAKKTFSRIRLNYVWALGYNLLAIPIAAGVLYPSTKFRLPPWIAGAAMAASSVSVVCSSLLLKYYKRPKKLNNLEINGIKIE | 989 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Sebi155g00104 | 989 | FunFam | Copper-transporting ATPase HMA5 | 50 | 121 | - | - | |
Sebi155g00104 | 989 | ProSiteProfiles | Heavy-metal-associated domain profile. | 51 | 117 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | ProSitePatterns | E1-E2 ATPases phosphorylation site. | 657 | 663 | IPR018303 | - | |
Sebi155g00104 | 989 | ProSiteProfiles | Heavy-metal-associated domain profile. | 204 | 270 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | FunFam | Probable copper-transporting ATPase HMA5 | 784 | 917 | - | - | |
Sebi155g00104 | 989 | Gene3D | - | 200 | 274 | - | - | |
Sebi155g00104 | 989 | ProSiteProfiles | Heavy-metal-associated domain profile. | 129 | 195 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | FunFam | ATPase copper transporting beta | 125 | 199 | - | - | |
Sebi155g00104 | 989 | PANTHER | P-TYPE CATION-TRANSPORTING ATPASE | 8 | 986 | - | - | |
Sebi155g00104 | 989 | Pfam | E1-E2 ATPase | 436 | 633 | - | - | |
Sebi155g00104 | 989 | Gene3D | - | 741 | 791 | IPR023299 | GO:0000166 | |
Sebi155g00104 | 989 | Gene3D | - | 662 | 740 | IPR023299 | GO:0000166 | |
Sebi155g00104 | 989 | NCBIfam | copper ion binding protein | 133 | 194 | IPR006122 | GO:0005507 | |
Sebi155g00104 | 989 | NCBIfam | copper ion binding protein | 52 | 116 | IPR006122 | GO:0005507 | |
Sebi155g00104 | 989 | CDD | HMA | 135 | 194 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | CDD | HMA | 207 | 266 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | ProSitePatterns | Heavy-metal-associated domain. | 57 | 86 | IPR017969 | GO:0046872 | |
Sebi155g00104 | 989 | Gene3D | - | 423 | 545 | - | - | |
Sebi155g00104 | 989 | SUPERFAMILY | HAD-like | 654 | 966 | IPR036412 | - | |
Sebi155g00104 | 989 | Pfam | Heavy-metal-associated domain | 209 | 266 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | Pfam | Heavy-metal-associated domain | 55 | 115 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | Pfam | Heavy-metal-associated domain | 133 | 193 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | Pfam | haloacid dehalogenase-like hydrolase | 651 | 874 | - | - | |
Sebi155g00104 | 989 | NCBIfam | heavy metal translocating P-type ATPase | 368 | 969 | IPR027256 | GO:0006812|GO:0016020|GO:0019829 | |
Sebi155g00104 | 989 | Gene3D | - | 128 | 199 | - | - | |
Sebi155g00104 | 989 | SFLD | C1.7: P-type atpase like | 637 | 911 | - | - | |
Sebi155g00104 | 989 | CDD | HMA | 57 | 117 | IPR006121 | GO:0046872 | |
Sebi155g00104 | 989 | PRINTS | P-type cation-transporting ATPase superfamily signature | 785 | 796 | - | - | |
Sebi155g00104 | 989 | PRINTS | P-type cation-transporting ATPase superfamily signature | 807 | 817 | - | - | |
Sebi155g00104 | 989 | PRINTS | P-type cation-transporting ATPase superfamily signature | 491 | 505 | - | - | |
Sebi155g00104 | 989 | PRINTS | P-type cation-transporting ATPase superfamily signature | 655 | 669 | - | - | |
Sebi155g00104 | 989 | PRINTS | P-type cation-transporting ATPase superfamily signature | 860 | 879 | - | - | |
Sebi155g00104 | 989 | PRINTS | P-type cation-transporting ATPase superfamily signature | 883 | 895 | - | - | |
Sebi155g00104 | 989 | FunFam | Copper-transporting ATPase 1, putative | 423 | 545 | - | - | |
Sebi155g00104 | 989 | SUPERFAMILY | Calcium ATPase, transduction domain A | 455 | 541 | IPR008250 | - | |
Sebi155g00104 | 989 | Gene3D | - | 47 | 118 | - | - | |
Sebi155g00104 | 989 | CDD | P-type_ATPase_Cu-like | 296 | 956 | - | - | |
Sebi155g00104 | 989 | SUPERFAMILY | Calcium ATPase, transmembrane domain M | 404 | 647 | IPR023298 | - | |
Sebi155g00104 | 989 | NCBIfam | HAD-IC family P-type ATPase | 408 | 939 | IPR001757 | GO:0005215|GO:0005524|GO:0016020|GO:0016887 | |
Sebi155g00104 | 989 | SUPERFAMILY | HMA, heavy metal-associated domain | 201 | 269 | IPR036163 | GO:0046872 | |
Sebi155g00104 | 989 | ProSitePatterns | Heavy-metal-associated domain. | 135 | 164 | IPR017969 | GO:0046872 | |
Sebi155g00104 | 989 | Gene3D | - | 622 | 917 | IPR023214 | - | |
Sebi155g00104 | 989 | SUPERFAMILY | HMA, heavy metal-associated domain | 46 | 122 | IPR036163 | GO:0046872 | |
Sebi155g00104 | 989 | SFLD | p-type atpase | 637 | 911 | IPR044492 | - | |
Sebi155g00104 | 989 | SUPERFAMILY | HMA, heavy metal-associated domain | 128 | 200 | IPR036163 | GO:0046872 | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase 1 signature | 153 | 174 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase 1 signature | 78 | 101 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase 1 signature | 107 | 127 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase 1 signature | 52 | 77 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 220 | 234 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 564 | 578 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 933 | 947 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 405 | 424 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 353 | 372 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 425 | 443 | - | - | |
Sebi155g00104 | 989 | PRINTS | Copper-transporting ATPase signature | 837 | 854 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Sebi155g00104 | Sebi-Chr155 | 1065698 | 1072431 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Sebi155g00104 | 51 | 989 | Primary Pumps ATPases | AT1G63440 | 74.231 | 0.0 | 1447 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Sebi155g00104 | K17686 | - | gmx:100817431 | 1600.1 |