Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00101 ATGAAATTTTGTGCTTCATTGTTGTTTCTCGCTTTGATTTCCATGCTCTCTCTTGTGGCTCCTGACACTGTACCCTCAAACGAAGTATGGGCGCTTACAAGCTTCAAAGAAGCTATCTATGAAGACCCATATAATGTCTTATCTGGTTGGAATACGATGGAATCCGATCCTTGTAACTGGTTTGGCGTCTCATGCACTGTGGCTCGAGATCATGTCATCAAGCTAAACATTTCAGGTTCATCATTAAAGGGGTTTCTTGCACCAGAGTTAGGGCAAATCACTTATTTGCAAGAACTAATTTTGCATGGAAACAATCTCATTGGAATAATACCTAAAGAGTTGTGCACGTTGAAGTCTCTCAAGGTGTTGGATTTGGGAATGAATCGGTTATCAGGACCAATTCCTCCAGAGATTGGAAATTTAACCTTACTTGTGACGATAAACTTGCAGTCCAACGGGTTGACAGGCAGGCTACCTCTAGAGCTTGGAAATTTGAGATACCTTAAAGAACTTCGGCTGGATAGGAATAAGCTTCAGGGACCTGTTCCTGCTGGTGACAGTTCTAATTTTGTTTCAAATGTACATGGAATGTATGCATCAAAGGAAAATGTAACTGGTTTCTGCCGTTCGTCTCAGTTAAAAGTAGCAGACTTTTCATATAATTTTTTTGTTGGTAGCATACCCAAATGCTTGGAGTATCTCCCGAGGTTAAGCTTTCAAAGGAACTGCCTCCAAAACAAAGACTTAAACCAGCGGCCTTCCATACAATGTGCTGGTGCTTCACCTGCCAAGAGTCAGCCAGTGGTGAACCCGTACCACCAACCTGCTGAATATTTGTCCAAGCATCACGGAGGATCAAAACCTGCTTGGCTTTTGGCTCTAGAAATAGTAACGGGAACTATGGTCGGTTCTCTCTTTCTGGTTGCTGTTCTCGCCGCTTTTCAGAGATGTAACAATAAATCATCTATTATTATTCCTTGGAAAAAATCTTCGAGCCAGAAAGATCATAACACAGTATATATAGACCCTGAGATGTTAAAGGATGTGAGAAGGTATAGTAGACAAGAGCTTGAAGTGGCCTGTGAAGACTTCAGCAACATAATTGGGTCCTCACCAGACAGTGTGGTCTACAAAGGAACCATGAAAGGTGGGCCTGAAATTGCCGTAATTTCCCTCTGCATCAAGGAGGAGCATTGGACAGGATATCTTGAACTCTATTTTCAGAGAGAGGTGGCAGAATTGGCAAGGTTAAATCATGAGAATACTGGAAAACTACTGGGCTATTGCAGAGAGAGCACTCCGTTTACAAGGATGTTGGTTTTTGATTATGCTTCAAATGGGACACTTCATGAGAACCTACATTGTTATGAAGAAGGATGTCAGTTCTCTTGGACAAGGCGTATGAATATTGCTATAGGCATTGCACGTGGACTCAAGTATTTGCACACAGAAGTTGAGCCTCCATTCACTATCTCAGAGCTGAATTCTAGTGCTGTATACCTTACAGAAGAATTTTCCCCTAAGTTGGTTGATTTTGAAAGTTGGAAGACAATTCTTGAAAGATCAGAAAAGAATTCTGGTTCTATTAGCAGTCAAGGTGCTGTTTGTGTTCTTCCAAACTCCCTCGAGGCGCGCCATCTTGATACCCAAGGAAACATATATGCTTTTGGGGTACTTCTGCTAGAGATAATCAGCGGGAGACCTCCATACTGTAAGGACAAAGGGTACTTGGTGGACTGGGCCAAGGACTATCTTGAAATGCCAGAAGTAATGTCACATTTGGTGGATCCTGAATTGAAACATTTTAGATATGATGACCTCAAAGTGATATGCGAGGTAATAACTCTTTGTATCAATCGTGATACAACTACGCGTCCATCTATGCGAGAATTATGCAGCATGCTGGAGAGCAGAATTGACACATCAGTAAGCGTGGAGCTCAAGTCATCATCTTTGGCTTGGGCTGAACTTGCACTTTTATCATAA 1986 0.4199 MKFCASLLFLALISMLSLVAPDTVPSNEVWALTSFKEAIYEDPYNVLSGWNTMESDPCNWFGVSCTVARDHVIKLNISGSSLKGFLAPELGQITYLQELILHGNNLIGIIPKELCTLKSLKVLDLGMNRLSGPIPPEIGNLTLLVTINLQSNGLTGRLPLELGNLRYLKELRLDRNKLQGPVPAGDSSNFVSNVHGMYASKENVTGFCRSSQLKVADFSYNFFVGSIPKCLEYLPRLSFQRNCLQNKDLNQRPSIQCAGASPAKSQPVVNPYHQPAEYLSKHHGGSKPAWLLALEIVTGTMVGSLFLVAVLAAFQRCNNKSSIIIPWKKSSSQKDHNTVYIDPEMLKDVRRYSRQELEVACEDFSNIIGSSPDSVVYKGTMKGGPEIAVISLCIKEEHWTGYLELYFQREVAELARLNHENTGKLLGYCRESTPFTRMLVFDYASNGTLHENLHCYEEGCQFSWTRRMNIAIGIARGLKYLHTEVEPPFTISELNSSAVYLTEEFSPKLVDFESWKTILERSEKNSGSISSQGAVCVLPNSLEARHLDTQGNIYAFGVLLLEIISGRPPYCKDKGYLVDWAKDYLEMPEVMSHLVDPELKHFRYDDLKVICEVITLCINRDTTTRPSMRELCSMLESRIDTSVSVELKSSSLAWAELALLS 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00101 661 Pfam Protein tyrosine and serine/threonine kinase 366 635 IPR001245 GO:0004672|GO:0006468
Sebi155g00101 661 ProSiteProfiles Protein kinase domain profile. 362 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00101 661 SUPERFAMILY L domain-like 26 238 - -
Sebi155g00101 661 SUPERFAMILY Protein kinase-like (PK-like) 339 636 IPR011009 -
Sebi155g00101 661 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 188 - -
Sebi155g00101 661 Gene3D Ribonuclease Inhibitor 27 140 IPR032675 -
Sebi155g00101 661 FunFam Inactive receptor-like serine/threonine-protein kinase 336 443 - -
Sebi155g00101 661 PANTHER PROTEIN MALE DISCOVERER 2 11 661 - -
Sebi155g00101 661 Gene3D Phosphorylase Kinase; domain 1 334 443 - -
Sebi155g00101 661 Pfam Leucine rich repeat N-terminal domain 27 65 IPR013210 -
Sebi155g00101 661 Gene3D Ribonuclease Inhibitor 141 266 IPR032675 -
Sebi155g00101 661 Gene3D Transferase(Phosphotransferase) domain 1 444 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00101 Sebi-Chr155 1042349 1046244 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00101 7 636 Receptor kinase-like Gene Family AT2G01210 27.639 1.48e-56 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-2 Sebi155g00101 PK_Tyr_Ser-Thr 3.5e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00101 - - gmx:100794714 1148.27