Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00089 ATGTTGGAGGTTAAAATGGAGCTCAAGGATTTCGAATTTGATTCACCTCATAGAGATATGCTCCATTTATGTCTTTCTTCGCCCAATTGCAATAATGGCACCTCCCTTCTGGAATCAACCCCTGTTCCTATTACAGGGATAATTAAAGCCCAAGCTAAATGCTCGACAAAGCGATGCTGGACAGAGGAAGAGGACAACATCTTGATTGAGTCAGTCAAGAAGCACGACGGAAGGAGCTGGAAGAAAATAGCTGAACACCTCCCTGGGCGAACCGACGTTCAATGCTTGCATCGCTGGCAAAAGGTTTTGAATCCTGATCTAGTAAAGGGATCATGGACAAAGGAGGAGGATGGTTGCCTAATTGAACTAGTAAGGAAGTATGGTTTCAAGAGATGGTCATTTATTGCAAAATTCTTACCAGGTCGTATTGGGAAGCAATGCCGAGAAAGGTGGCACAATCACCTTGATCCAGCTATAAAGAAGGATGCATGGACTGATGAGGAGGAATCAATACTTGCTTGTTATCACCAAATATACGGCAGTAGGTGGGCAGAAATTGCAAGGTTTCTTCCTGGAAGGACTGACAATGCTATAAAAAATCACTGGAACTGCTCAATGAAGAAGAAATTGTGTGCATCACCTTTTGGTTGTGACATAAATGTTGCCACTTCCAGTTCCTGCTCTTCTGGAATATTTAATGGAATGGATTCTCTCAAGCAGAATCACTGGTTGATGCACAGTGTTGATAACTTTCCCACAAAATTGTTTCTTCAAAATGCTTCTGGAGTGGAATTTTGCTCTGAAAAAAGCTGTTTTGAGCGGGGAACTCCTAGGGCCTCAAGTAAAGGTGAAAGCAGATCAGTTAATTTACCAAATGAGGCATGTGCCATTACATGTTGCAGAGACTATGCCGACACAATTAAACCTACAGGCTCGTTATTGGATAATTCTCTGGATATGCTTGCTACAGATTTGGATTGTTTGCCTCTTGCAAGTACTGCTACTTATGAGGCATATAAATCTCCCAAACGGCAAAAGCTTTCTTCCTCTGATGCAAAGTTTATTGTGGGTGATGAATGGGATAGTCCTTATGTGAACTACTTAAAATCGGCTAATTGTGAGAAGAAAGGTCAAGTTGTAAAGGGAAGCAACAAAATCAACAGTACGCCAGATAATGATGCAGACAACACAAATGACGTATATGATTGCGATCCTGTTGAACGCTCCCCAGTGGAAGACTTGGTGTACCCAATAGAATTTAATGAATATCTAAGTCCGAAAACACACATCGGATGCGCGGACAATAAAGGTTGTCGTTATGTTCCTCCAGCATCTACACTGAGGAATTGCCTGGACAGCATCAGCCCAGAATCTGTACTAAGAAGCTTAGCAATGACCTATGAGAATGTTCCTTCTATTATTAGGAAAAGAACTCCCAGGAAAGCATGCAGTTCTGACTATTGTGACAGTGCCCAAACACCTTCGAGAATGATCATCTCTTCTCCTGAAGCAAAACCTTTAATTGGCTTGGATAATTTAAAACTGAACTAG 1551 0.4172 MLEVKMELKDFEFDSPHRDMLHLCLSSPNCNNGTSLLESTPVPITGIIKAQAKCSTKRCWTEEEDNILIESVKKHDGRSWKKIAEHLPGRTDVQCLHRWQKVLNPDLVKGSWTKEEDGCLIELVRKYGFKRWSFIAKFLPGRIGKQCRERWHNHLDPAIKKDAWTDEEESILACYHQIYGSRWAEIARFLPGRTDNAIKNHWNCSMKKKLCASPFGCDINVATSSSCSSGIFNGMDSLKQNHWLMHSVDNFPTKLFLQNASGVEFCSEKSCFERGTPRASSKGESRSVNLPNEACAITCCRDYADTIKPTGSLLDNSLDMLATDLDCLPLASTATYEAYKSPKRQKLSSSDAKFIVGDEWDSPYVNYLKSANCEKKGQVVKGSNKINSTPDNDADNTNDVYDCDPVERSPVEDLVYPIEFNEYLSPKTHIGCADNKGCRYVPPASTLRNCLDSISPESVLRSLAMTYENVPSIIRKRTPRKACSSDYCDSAQTPSRMIISSPEAKPLIGLDNLKLN 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00089 516 CDD SANT 111 155 IPR001005 -
Sebi155g00089 516 SUPERFAMILY Homeodomain-like 106 202 IPR009057 -
Sebi155g00089 516 SMART sant 56 105 IPR001005 -
Sebi155g00089 516 SMART sant 160 208 IPR001005 -
Sebi155g00089 516 SMART sant 108 157 IPR001005 -
Sebi155g00089 516 FunFam Transcriptional activator Myb isoform A 56 108 - -
Sebi155g00089 516 CDD SANT 60 103 IPR001005 -
Sebi155g00089 516 SUPERFAMILY Homeodomain-like 56 110 IPR009057 -
Sebi155g00089 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 57 103 IPR017930 -
Sebi155g00089 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 160 210 IPR017930 -
Sebi155g00089 516 ProSiteProfiles Myb-like domain profile. 60 103 IPR001005 -
Sebi155g00089 516 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 104 159 IPR017930 -
Sebi155g00089 516 CDD SANT 163 203 IPR001005 -
Sebi155g00089 516 FunFam Transcriptional activator Myb isoform A 109 161 - -
Sebi155g00089 516 Gene3D - 56 108 - -
Sebi155g00089 516 ProSiteProfiles Myb-like domain profile. 156 206 IPR001005 -
Sebi155g00089 516 PANTHER MYB PROTEIN-RELATED 57 128 - -
Sebi155g00089 516 Gene3D - 109 160 - -
Sebi155g00089 516 Pfam Myb-like DNA-binding domain 109 155 IPR001005 -
Sebi155g00089 516 Pfam Myb-like DNA-binding domain 58 103 IPR001005 -
Sebi155g00089 516 Pfam Myb-like DNA-binding domain 161 203 IPR001005 -
Sebi155g00089 516 ProSiteProfiles Myb-like domain profile. 104 155 IPR001005 -
Sebi155g00089 516 Gene3D - 163 210 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00089 Sebi-Chr155 915866 919066 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00089 57 210 MYB Transcription Factor Family AT5G02320 70.130 2.56e-74 241
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Sebi155g00089 Myb_DNA-binding 4.5e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00089 - - aprc:113869477 645.58