Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00086 ATGTACAGGCAACCTGTTGCACACCCCACAAGCGGAGAGGCTCCGGCGACTTCAATGAGCGGCGAGGAGAGAGAAATCAGTGCGTACCAAGCTCTGGTGGATCGGTGTCGGAGCCTGGAGGAGAAACAAGCCAAGCTGAGGGAACAGTTCGATGAGCTGATGCAGGAGAAGAAGCTCTCAGTCAGGGATCATCAAGAGCAGCTGATCGCAGATTCAACCGCTGGTTTTCTTTCCGGATTCTTCTTCTCTGGAAGTCCCTATGCAACAGTCTTGAAATGCATGGGCCACGCCGTTTATGTCCATACAGTTTCCTCCGGCGAGATCATATACTGGATGCTGCACTTTTTAATGAAACAGTTGCGCGCTGTAGGGAAGGGGAGGGGAATGGGATGCGTTTCTTTTGGCTGTAAGACTGGTGTTTGTTATGTGTTCACTCACAAGATAGCTGAGAATGGTGGGGCTAGAAGCCTTGAACTAGAAGACCTTGTGCCTCACTTCCAGTTGATCAAGGAGGCTTTGGCATCATGTAAAACAAGCATTCCATTTGAAACTAAACGGAATCATGCGGCAGAAACTCTGTATGGATGGAAGGACTATGAAATCATTGGACAAAGAGTAACTCAGTTCCTAATTGCTGAGGAATATTATGCATCTCTGCAAAAGATTCTAGAAAGGTTGACCGCAGGAGTGCCATGGTCTGGGCAATTTCCTTTCAAGAAGAGGTCTGGTGAAGTATTTATGGCAATGGTAACAAAAACTCCTCTTTATGAGGATGGTGAGATTGTTGGTGTTATCACTGTTTCAAGTGATGCAGCTGTATTTAACTCTCTAGATTCAGGAAATCAAAGAACTTACCAATCTGGTGCCAATGGTCAACCTGGAGTACGGAGGCATCAAAGTTTCTCCCGCTCCGGCATACAGATGACACAGTTTCCAGGAATACATCAACATGAAATGAAACCTCATTCTAGACATCACCATAAGGAAAACACAACTGGCAGGGAGGCCTCTCTGAAGGATGAGTCTACTCCTGAATTCGGCCAACCTTCTAAAATTGCAGCTAAAGCTCTTGCTAAGCTTCAAATTGGGGGAGGTGGAAAATGTGGGAAGGATACTGGCAGAATTAAAAATAATTGCACAACTGATAATGACTCATCTGGAGGTTCAGTGGCATTAACTACACACCAGGATGTTGCTAATGGAGTGGATAAAGAAGGAAATCTCCATAAATGTGATTCTTTATTTGTTACAAAGAGAGCAGATGCTAAAGTTTGTGCAGATAGAACTTCTAGTGCTTTCAAAGTTAGTTCTTCTAAGCCTTTCTCAGGGGAGTGTTATGAGTGTTTTGGTTCTGCTGTTCCCCAAGACCCATTGCTAAGATTACACTGTCAATTCAATCCAAAGAAATTGGAGCCAGAAGCTACAAGTATGGTGATAAAAGATGAAGTGCAAAAGCAGCAAGAAGGGTTGCAATTGCCAAGTTCGAGGGAAAGTATAGGCAGCCATGAGAGTTCATCAAGCAAGGGGGATAATGAGTCAAACTCCGTTGTACAGTGTGAAATCCATTGGGAAGACCTTCAATTAAGAGAAGAGATTGGACAGGGTTCTTATGCTGCTGTTTATCATGGTATTTGGAATGGATCGGATGTTGCCATCAAGGTTTACTTTGGGAATGGATACACAGAGGAGACTTTACAAGACTACAGAAAAGAGATTGATATAATGAAGAGATTGAGACACCCTAATGTATTGCTTTTCATGGGAGCAGTATATTCACAGGAGAGGCTTGCCATTGTGACAGAGTTATTACCTAGGGGAAGCCTTTTCAAAACTCTTCACAATGACAATCAGACATTAGACATCAGAAGGCGTCTAAGGATGGCTCTTGATGTTGCTAAAGGAATGAATTATCTTCATCACAGAAATCCGCCAATCGTGCATAGAGACCTAAAGTCTTCTAACCTACTTGTTGATAAAAACTGGACTGTCAAGGTTGGAGACTTTGGCTTGTCAAGGTTGAAGGATGCAACTTTGTTGACTACCAAATCTGGGAGAGGCACCCCTCAATGGATGGCCCCTGAGATCCTTCGCAATGAACCTTCAAATGAAAAGTCTGATGTGTTCAGTTTTGGTGTCATCCTCTGGGAACTAATGACTCAATCTATTCCCTGGAAAAATTTGAATTCCTTACAGGTTGTTGGAGTCGTAGGCTTTATGGATAGAAGACTGGACCTGCCGGAGGGGCTTGACCCAAATGTAGCATCAATAATAAATGATTGCTGGAGAAGTGATCCAGAACAGCGTCCGTCATTTGAAGAGCTAATACGGAGAATGATGTTTGTTCTCAACAGAGTAACAGCAGTGTCGAGTAGGAGAATTTCAGAATCATAA 2391 0.4354 MYRQPVAHPTSGEAPATSMSGEEREISAYQALVDRCRSLEEKQAKLREQFDELMQEKKLSVRDHQEQLIADSTAGFLSGFFFSGSPYATVLKCMGHAVYVHTVSSGEIIYWMLHFLMKQLRAVGKGRGMGCVSFGCKTGVCYVFTHKIAENGGARSLELEDLVPHFQLIKEALASCKTSIPFETKRNHAAETLYGWKDYEIIGQRVTQFLIAEEYYASLQKILERLTAGVPWSGQFPFKKRSGEVFMAMVTKTPLYEDGEIVGVITVSSDAAVFNSLDSGNQRTYQSGANGQPGVRRHQSFSRSGIQMTQFPGIHQHEMKPHSRHHHKENTTGREASLKDESTPEFGQPSKIAAKALAKLQIGGGGKCGKDTGRIKNNCTTDNDSSGGSVALTTHQDVANGVDKEGNLHKCDSLFVTKRADAKVCADRTSSAFKVSSSKPFSGECYECFGSAVPQDPLLRLHCQFNPKKLEPEATSMVIKDEVQKQQEGLQLPSSRESIGSHESSSSKGDNESNSVVQCEIHWEDLQLREEIGQGSYAAVYHGIWNGSDVAIKVYFGNGYTEETLQDYRKEIDIMKRLRHPNVLLFMGAVYSQERLAIVTELLPRGSLFKTLHNDNQTLDIRRRLRMALDVAKGMNYLHHRNPPIVHRDLKSSNLLVDKNWTVKVGDFGLSRLKDATLLTTKSGRGTPQWMAPEILRNEPSNEKSDVFSFGVILWELMTQSIPWKNLNSLQVVGVVGFMDRRLDLPEGLDPNVASIINDCWRSDPEQRPSFEELIRRMMFVLNRVTAVSSRRISES 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00086 796 Coils Coil 29 59 - -
Sebi155g00086 796 Gene3D Transferase(Phosphotransferase) domain 1 605 789 - -
Sebi155g00086 796 ProSitePatterns Serine/Threonine protein kinases active-site signature. 645 657 IPR008271 GO:0004672|GO:0006468
Sebi155g00086 796 ProSiteProfiles Protein kinase domain profile. 526 781 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00086 796 CDD PAS 187 270 IPR000014 -
Sebi155g00086 796 MobiDBLite consensus disorder prediction 487 514 - -
Sebi155g00086 796 FunFam PAS domain-containing protein tyrosine kinase family protein 604 794 - -
Sebi155g00086 796 CDD STKc_MAP3K-like 532 778 - -
Sebi155g00086 796 MobiDBLite consensus disorder prediction 484 514 - -
Sebi155g00086 796 SUPERFAMILY Protein kinase-like (PK-like) 515 785 IPR011009 -
Sebi155g00086 796 NCBIfam PAS domain S-box protein 186 270 IPR000014 -
Sebi155g00086 796 Pfam Protein tyrosine and serine/threonine kinase 526 777 IPR001245 GO:0004672|GO:0006468
Sebi155g00086 796 ProSiteProfiles PAS repeat profile. 187 230 IPR000014 -
Sebi155g00086 796 FunFam Serine/threonine-protein kinase isoform 1 517 604 - -
Sebi155g00086 796 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 291 778 - -
Sebi155g00086 796 Gene3D Phosphorylase Kinase; domain 1 519 603 - -
Sebi155g00086 796 MobiDBLite consensus disorder prediction 317 346 - -
Sebi155g00086 796 SUPERFAMILY PYP-like sensor domain (PAS domain) 186 270 IPR035965 -
Sebi155g00086 796 Gene3D PAS domain 184 273 - -
Sebi155g00086 796 PRINTS Tyrosine kinase catalytic domain signature 705 727 IPR001245 GO:0004672|GO:0006468
Sebi155g00086 796 PRINTS Tyrosine kinase catalytic domain signature 639 657 IPR001245 GO:0004672|GO:0006468
Sebi155g00086 796 PRINTS Tyrosine kinase catalytic domain signature 686 696 IPR001245 GO:0004672|GO:0006468
Sebi155g00086 796 PRINTS Tyrosine kinase catalytic domain signature 600 613 IPR001245 GO:0004672|GO:0006468
Sebi155g00086 796 PRINTS Tyrosine kinase catalytic domain signature 749 771 IPR001245 GO:0004672|GO:0006468
Sebi155g00086 796 SMART serkin_6 526 780 IPR000719 GO:0004672|GO:0005524|GO:0006468
Sebi155g00086 796 MobiDBLite consensus disorder prediction 1 22 - -
Sebi155g00086 796 ProSitePatterns Protein kinases ATP-binding region signature. 532 553 IPR017441 GO:0005524
Sebi155g00086 796 Pfam PAS domain 186 270 IPR000014 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00086 Sebi-Chr155 882554 889119 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00086 189 784 MAP Kinase Kinase Kinase AT4G23050 47.917 0.0 536
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Sebi155g00086 PK_Tyr_Ser-Thr 1.4e-67 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00086 - - gmx:100813707 953.74