Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00077 ATGGCCTCCTCACCATCTTCCAAGAGGCACCCACTGTATCATGGAATCCGAAGCCGCGGAGGAAAATGGGTGTCGGAAATCAGGGAGCCACGTAAGGCATCCCGCATATGGCTTGGGACATTCCCAACACCGGAGATGGCGGCTGCCGCCTTTGACGTGGCGGCGCTGGCATTGAAAGGTGACAATGCGGCTCTGAATCTCAACTTCCCTGACTTAATTGGAAAGTATGAAATGCCTGTAACTAACTCTCCTGCTGACATACGCAGTGCTGCCACTGCTGCAGCCTCACTGTTGAAAGGTGAACCTGAAGCGAGTCACCATGAAATGAATGCATCATCATCAATTAATGTAGAAGTAGGTAACTGCAGTGATAATAGTACTATGACTTCATGGTTTGAAAGTGATTTCATAGACGAGGAGGCGATATTCGGCATGCCAAGTTTGCTGGTGGACATGGCTAGGGGAATGCTTCTCTCACCTCCCAGAATGAGCCCACCACCGTCTGACAACTTGCCCGACAGGCAAGCTGGAGAAACTTTGTGGAGTTATTTTTAA 555 0.4973 MASSPSSKRHPLYHGIRSRGGKWVSEIREPRKASRIWLGTFPTPEMAAAAFDVAALALKGDNAALNLNFPDLIGKYEMPVTNSPADIRSAATAAASLLKGEPEASHHEMNASSSINVEVGNCSDNSTMTSWFESDFIDEEAIFGMPSLLVDMARGMLLSPPRMSPPPSDNLPDRQAGETLWSYF 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00077 184 CDD AP2 11 72 IPR001471 GO:0003700|GO:0006355
Sebi155g00077 184 Gene3D AP2/ERF domain 12 71 IPR036955 GO:0003700|GO:0006355
Sebi155g00077 184 ProSiteProfiles AP2/ERF domain profile. 12 70 IPR001471 GO:0003700|GO:0006355
Sebi155g00077 184 Pfam AP2 domain 13 60 IPR001471 GO:0003700|GO:0006355
Sebi155g00077 184 SUPERFAMILY DNA-binding domain 12 68 IPR016177 GO:0003677
Sebi155g00077 184 SMART rav1_2 12 74 IPR001471 GO:0003700|GO:0006355
Sebi155g00077 184 MobiDBLite consensus disorder prediction 160 184 - -
Sebi155g00077 184 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF042-RELATED 7 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00077 Sebi-Chr155 770130 770684 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00077 7 183 AP2-EREBP Transcription Factor Family AT5G52020 50.549 1.13e-44 146
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Sebi155g00077 AP2 8.2e-08 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00077 - - gmx:100811020 228.409