Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00076 ATGAACATTTTCAGATCATTTGACGAGCTGAACTATAGCTACGGAGAGGCATCTTCTTCGTCGGAAACAAGTTCCTCCAATAACCGTAGAAGGTGTGCTACTCACTCAGATGAAGAAGTTATATTAGCGTCAGCGATGCCAAAGAAGCGAGCAGGGCGGAGAATATTCAAGGAAACGAGGCACCCAGTGTACCGAGGAGTGCGACGGAGGAACAAAAACAAGTGGGTTTGCGAGATGCGAATCCCTAACAACAACAAATCAAGGATTTGGCTCGGAACATACCCAACCCCTGAAATGGCTGCCAGGGCACATGATGTTGCCGCGCTGGCACTTCGAGGAAAATCTGCTTGTCTCAATTTCGCAGACTCGGCGTGGCGGTTGACGTTGCCGGCGTCAACCGATGCGGAGGAGATTAGGAGAGCAGCTGTGGAGGCTGCTGAATTGTGTGCGGCGGAGGACAACCAGCTGCAGCAGAGTGTGAAGGACATTACTGTTGATTATGAATTTTGTAGCGTTGAGGATCACATGGTCATGGAAGATACCAATAAGCCTATGCAACAACAGGGGATGTATGTGGAAGAAGCTCCGGCGGTGTCAGAATTTGAAAAATTGCTTTTGAGTATTGCTGATGAGCCTTTGTTGTCTCCTCCTCCTTGTGCAAGAAATGGTTGGGACTGGAATGACGTGGACATATTTGATGCTGAAGTGTCATTATGGAACTTTTCCATATGA 732 0.4809 MNIFRSFDELNYSYGEASSSSETSSSNNRRRCATHSDEEVILASAMPKKRAGRRIFKETRHPVYRGVRRRNKNKWVCEMRIPNNNKSRIWLGTYPTPEMAARAHDVAALALRGKSACLNFADSAWRLTLPASTDAEEIRRAAVEAAELCAAEDNQLQQSVKDITVDYEFCSVEDHMVMEDTNKPMQQQGMYVEEAPAVSEFEKLLLSIADEPLLSPPPCARNGWDWNDVDIFDAEVSLWNFSI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00076 243 CDD AP2 64 123 IPR001471 GO:0003700|GO:0006355
Sebi155g00076 243 Pfam AP2 domain 62 113 IPR001471 GO:0003700|GO:0006355
Sebi155g00076 243 SUPERFAMILY DNA-binding domain 63 123 IPR016177 GO:0003677
Sebi155g00076 243 PRINTS Ethylene responsive element binding protein signature 87 103 IPR001471 GO:0003700|GO:0006355
Sebi155g00076 243 PRINTS Ethylene responsive element binding protein signature 64 75 IPR001471 GO:0003700|GO:0006355
Sebi155g00076 243 SMART rav1_2 63 127 IPR001471 GO:0003700|GO:0006355
Sebi155g00076 243 Gene3D AP2/ERF domain 63 122 IPR036955 GO:0003700|GO:0006355
Sebi155g00076 243 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 1D 18 240 IPR045277 GO:0003700
Sebi155g00076 243 ProSiteProfiles AP2/ERF domain profile. 63 121 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00076 Sebi-Chr155 748235 748966 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00076 18 241 AP2-EREBP Transcription Factor Family AT4G25470 47.556 2.05e-57 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Sebi155g00076 AP2 2.1e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00076 - - gmx:100789097 268.47