Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Sebi155g00069 ATGGCTCATTTGGTTTATGGCGAAACTCCATCCTTCGGAGGCTCACACCATGGACAGGCTCAACAATCTGTTCCCTTTCCAACCACTTCCACTTCCTTAAGGACTCTGCTCTTACATGGCAACTTGGAAATATGGGTTCATGAGGCCAGAAACCTTCCTAACATGGACATGTTTCACAAGAAGATGGGGGACATGTTTTCCAGGTTACCTAAAAGACTTGGCAACAAAATTGAAAGCCGCGTATCCCATAATTTGACCAGTGATCCATATGTCACGGTGTCTGTGGCGGGTGTTGTCATTGCAAGGACTTTTGTCATCAGAAACAATGAGAACCCTGTTTGGATGCAGCATTTTAATGTCCCCGTTGCACATGTTTCTGCTGAAGTACACTTCGTTGTAAAAGACAGCGACATTGTAGGCTCACAGATTATTGGTGCAGTGGGAATTCCTGTGGAACAGTTTTGGAATGGTACAAAAGTTGAGGGCTTTTTCCCCATCCTTAGTGATAAAGAGAAAACCGTTAAAGCTGGAGCAGTATTGAGTTTATCCATTCAGTACACTCCTGTTGATAAGGTGGCCCTTTATAGTCATGGAGTAGGTGCTGCTCCTCATTATCAAGGGGTTCCTGATACATACTTTCCCCTTAGAAAGGGTGGCAAAGTGACACTTTATCAAGATGCTCATGCTGAAGAAGGTTGCCTTCCCAGTTTGAAGGTTGATGGGGATGTGAATTATAAGCATGGAAGTTGTTGGCATGACATCTTTGAAGCAATACGTCAGGCACGTCGATTAGTGTACATTGTGGGTTGGTCTGTGTACTATAATGTTAGTCTCATTCGGGATGCAGCAGGTGATGACAAAGTTTCCACTTTAGGTGACCTTCTCAAAGCCAAATCACAGGAAGGTGTGAGAGTGCTGCTCCTTGTGTGGGATGATCCTACTTCTAGAAGCATGCTTGGATTTAAAACGGAAGGAATGGCTACTAATGGAAAAATGGGCACTCGTGATGAGGACACTCGCCATTTTTTCAAACACTCTTCAGTACGAGTGCTTCTTTGCCCACGAGCTGGTAGAAAAGGACATAGCTTGCTCAAACAAACGGAAGCTGGAACAATCTATACCCATCATCAGAAGACAGTCATTGTGGATGCTGATGCAGGTCACAATAAAAGAAAGATCATAGCTTTCATCGGAGGTCTTGATTTATGTGGAGGTCGATATGATACCCCGAAACATTCTCTCTTTAGGACTTTGCAGACAACACACAAAGATGACTATCATAATCCTAACTTTGAGGGGCCTGTTACTGGTTGTCCAAGACAACCATGGCATGATTTGCACTCCCAAGTGGATGGTCCAGCTGCATATGACATCCTCACCAATTTTGAGGAGCGTTGGTTAAGGGCTTCAAAAATGCATAGACTTCAAAAAATTAGAAGTTCACAGGATGATTCATTACTGAAAATTGATAGAATCTCTGACATTATTGGCATTGATGAAGTTCCTTGTCTAAATGAAGATAACCCAGAGACTTGGCATGTCCAGGTCTTCCGTTCAATCGATTCCAATTCTGTGAAAGGATTTCCCAAGGAACCAAAAGAGGCTATAAAAAGGAACTTGCTTTGTGGAAAGAATGTACTGATAGACATGAGCATACATTCTGCGTATGTCAAGGCAATCCGATCTGCCCAAAAGTTCATCTATATTGAGAATCAATACTTCCTTGGCTCATCCTATAATTGGGATTCTTACAAAGACATGGGTGCAAACAACTTAATTCCAATGGAAATTGCGCTAAAAATAGCCAACAAAATCAAACAAAAGGAGAGATTCTCTGTGTATATAGTCATTCCTATGTGGCCTGAAGGTGTACCCTCAAGTAATTTTATGCAGCGGATTCTATTTTGGCAGTTCAAAACAATGGAAATGATGTATGAAACGATTTACAAGGCGTTACAGGAGGCTGGGCTTGAAAATGAGTATGAACCACAGGACTACTTGAATTTCTTTTGCCTTGGCAATCGTGAGCTCCCTGCAGATAATGACAACATTTTAAATGCTGTAAATCCTACTGGAGAGAACACTCCTCAGGTGTATGGTTATAGAATGTCACTATGGAGCGAGCATATAGGTGATGTGGAAGAATGTTTCGAGCGACCAGAGACGGTTGAATGCGTGAGAAGGATAAGGTCATTGAGTGAGCATAACTGGAGACAGTACGCAGCTGATGAGGTAACTGAAATGAAAAGTCATCTCCTAAAATACCCTCTTGAAGTTGATTCAAAGGGTAAGGTCAAGCCTCTTTCTGGCTGTGAGACATTCCCGGATGTTGGTGGAAAAATAAAGGGCACCTTCACTCTACTTAAAGTTAAAGAAAATCTCACCATCTGA 2391 0.4233 MAHLVYGETPSFGGSHHGQAQQSVPFPTTSTSLRTLLLHGNLEIWVHEARNLPNMDMFHKKMGDMFSRLPKRLGNKIESRVSHNLTSDPYVTVSVAGVVIARTFVIRNNENPVWMQHFNVPVAHVSAEVHFVVKDSDIVGSQIIGAVGIPVEQFWNGTKVEGFFPILSDKEKTVKAGAVLSLSIQYTPVDKVALYSHGVGAAPHYQGVPDTYFPLRKGGKVTLYQDAHAEEGCLPSLKVDGDVNYKHGSCWHDIFEAIRQARRLVYIVGWSVYYNVSLIRDAAGDDKVSTLGDLLKAKSQEGVRVLLLVWDDPTSRSMLGFKTEGMATNGKMGTRDEDTRHFFKHSSVRVLLCPRAGRKGHSLLKQTEAGTIYTHHQKTVIVDADAGHNKRKIIAFIGGLDLCGGRYDTPKHSLFRTLQTTHKDDYHNPNFEGPVTGCPRQPWHDLHSQVDGPAAYDILTNFEERWLRASKMHRLQKIRSSQDDSLLKIDRISDIIGIDEVPCLNEDNPETWHVQVFRSIDSNSVKGFPKEPKEAIKRNLLCGKNVLIDMSIHSAYVKAIRSAQKFIYIENQYFLGSSYNWDSYKDMGANNLIPMEIALKIANKIKQKERFSVYIVIPMWPEGVPSSNFMQRILFWQFKTMEMMYETIYKALQEAGLENEYEPQDYLNFFCLGNRELPADNDNILNAVNPTGENTPQVYGYRMSLWSEHIGDVEECFERPETVECVRRIRSLSEHNWRQYAADEVTEMKSHLLKYPLEVDSKGKVKPLSGCETFPDVGGKIKGTFTLLKVKENLTI 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Sebi155g00069 796 Gene3D Endonuclease Chain A 238 489 - -
Sebi155g00069 796 Pfam C2 domain 40 166 IPR000008 -
Sebi155g00069 796 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 38 189 IPR035892 -
Sebi155g00069 796 Pfam Phospholipase D Active site motif 372 406 IPR001736 GO:0003824
Sebi155g00069 796 PANTHER PHOSPHOLIPASE D 696 783 IPR015679 -
Sebi155g00069 796 SUPERFAMILY Phospholipase D/nuclease 206 473 - -
Sebi155g00069 796 PIRSF PLD_plant 27 697 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi155g00069 796 PIRSF PLD_plant 685 796 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Sebi155g00069 796 SUPERFAMILY Phospholipase D/nuclease 551 635 - -
Sebi155g00069 796 ProSiteProfiles C2 domain profile. 23 164 IPR000008 -
Sebi155g00069 796 CDD C2_plant_PLD 35 187 - -
Sebi155g00069 796 Gene3D C2 domain 15 176 IPR035892 -
Sebi155g00069 796 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 371 406 IPR001736 GO:0003824
Sebi155g00069 796 Gene3D Endonuclease Chain A 517 681 - -
Sebi155g00069 796 SMART C2_3c 41 163 IPR000008 -
Sebi155g00069 796 Pfam Phospholipase D C terminal 714 784 IPR024632 -
Sebi155g00069 796 FunFam Phospholipase D delta 241 485 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Sebi155g00069 Sebi-Chr155 666184 671096 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Sebi155g00069 697 796 Phospholipase D Gene Family (Wang group) AT2G42010 61.000 1.79e-37 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Sebi155g00069 K01115 - gmx:100786241 1188.71